Protein–RNA interactions for Protein: Q8CIG3

Kdm1b, Lysine-specific histone demethylase 1B, mousemouse

Predictions only

Length 826 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1bQ8CIG3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.64■■□□□ 1.53
Kdm1bQ8CIG3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Kdm1bQ8CIG3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.63■■□□□ 1.53
Kdm1bQ8CIG3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Kdm1bQ8CIG3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Kdm1bQ8CIG3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Kdm1bQ8CIG3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Kdm1bQ8CIG3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Kdm1bQ8CIG3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Kdm1bQ8CIG3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.61■■□□□ 1.53
Kdm1bQ8CIG3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Kdm1bQ8CIG3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
Kdm1bQ8CIG3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Kdm1bQ8CIG3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.59■■□□□ 1.53
Kdm1bQ8CIG3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Kdm1bQ8CIG3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Kdm1bQ8CIG3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
Kdm1bQ8CIG3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.58■■□□□ 1.53
Kdm1bQ8CIG3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Kdm1bQ8CIG3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Kdm1bQ8CIG3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Kdm1bQ8CIG3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Kdm1bQ8CIG3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.54■■□□□ 1.52
Kdm1bQ8CIG3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Kdm1bQ8CIG3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Kdm1bQ8CIG3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Kdm1bQ8CIG3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Kdm1bQ8CIG3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Kdm1bQ8CIG3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Kdm1bQ8CIG3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Kdm1bQ8CIG3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Kdm1bQ8CIG3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
Kdm1bQ8CIG3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Kdm1bQ8CIG3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.49■■□□□ 1.51
Kdm1bQ8CIG3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Kdm1bQ8CIG3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Kdm1bQ8CIG3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Kdm1bQ8CIG3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Kdm1bQ8CIG3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Kdm1bQ8CIG3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Kdm1bQ8CIG3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Kdm1bQ8CIG3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Kdm1bQ8CIG3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Kdm1bQ8CIG3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Kdm1bQ8CIG3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.46■■□□□ 1.51
Kdm1bQ8CIG3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.46■■□□□ 1.51
Kdm1bQ8CIG3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Kdm1bQ8CIG3 Nkain2-201ENSMUST00000092602 558 ntBASIC24.46■■□□□ 1.51
Kdm1bQ8CIG3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Kdm1bQ8CIG3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Kdm1bQ8CIG3 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.45■■□□□ 1.5
Kdm1bQ8CIG3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Kdm1bQ8CIG3 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.45■■□□□ 1.5
Kdm1bQ8CIG3 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.45■■□□□ 1.5
Kdm1bQ8CIG3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Kdm1bQ8CIG3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Kdm1bQ8CIG3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Kdm1bQ8CIG3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Kdm1bQ8CIG3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Kdm1bQ8CIG3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Kdm1bQ8CIG3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Kdm1bQ8CIG3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.42■■□□□ 1.5
Kdm1bQ8CIG3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Kdm1bQ8CIG3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Kdm1bQ8CIG3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Kdm1bQ8CIG3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Kdm1bQ8CIG3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Kdm1bQ8CIG3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.39■■□□□ 1.49
Kdm1bQ8CIG3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.39■■□□□ 1.49
Kdm1bQ8CIG3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Kdm1bQ8CIG3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Kdm1bQ8CIG3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.38■■□□□ 1.49
Kdm1bQ8CIG3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Kdm1bQ8CIG3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Kdm1bQ8CIG3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Kdm1bQ8CIG3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Kdm1bQ8CIG3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Kdm1bQ8CIG3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.37■■□□□ 1.49
Kdm1bQ8CIG3 Particl-201ENSMUST00000205370 1560 ntBASIC24.37■■□□□ 1.49
Kdm1bQ8CIG3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
Kdm1bQ8CIG3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
Kdm1bQ8CIG3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Kdm1bQ8CIG3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kdm1bQ8CIG3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kdm1bQ8CIG3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kdm1bQ8CIG3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kdm1bQ8CIG3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.34■■□□□ 1.49
Kdm1bQ8CIG3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Kdm1bQ8CIG3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Kdm1bQ8CIG3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Kdm1bQ8CIG3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Kdm1bQ8CIG3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Kdm1bQ8CIG3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Kdm1bQ8CIG3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Kdm1bQ8CIG3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.31■■□□□ 1.48
Kdm1bQ8CIG3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Kdm1bQ8CIG3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
Kdm1bQ8CIG3 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.3■■□□□ 1.48
Kdm1bQ8CIG3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Kdm1bQ8CIG3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms