Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pdlim5Q8CI51 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pdlim5Q8CI51 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pdlim5Q8CI51 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdlim5Q8CI51 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.71■■□□□ 1.07
Pdlim5Q8CI51 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Pdlim5Q8CI51 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdlim5Q8CI51 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
Pdlim5Q8CI51 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdlim5Q8CI51 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdlim5Q8CI51 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim5Q8CI51 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim5Q8CI51 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdlim5Q8CI51 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Pdlim5Q8CI51 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Pdlim5Q8CI51 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdlim5Q8CI51 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pdlim5Q8CI51 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pdlim5Q8CI51 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.67■■□□□ 1.06
Pdlim5Q8CI51 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim5Q8CI51 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdlim5Q8CI51 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.66■■□□□ 1.06
Pdlim5Q8CI51 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pdlim5Q8CI51 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.65■■□□□ 1.06
Pdlim5Q8CI51 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pdlim5Q8CI51 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pdlim5Q8CI51 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pdlim5Q8CI51 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pdlim5Q8CI51 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pdlim5Q8CI51 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pdlim5Q8CI51 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdlim5Q8CI51 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdlim5Q8CI51 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdlim5Q8CI51 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pdlim5Q8CI51 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pdlim5Q8CI51 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pdlim5Q8CI51 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pdlim5Q8CI51 Gm30023-201ENSMUST00000197970 889 ntBASIC21.6■■□□□ 1.05
Pdlim5Q8CI51 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pdlim5Q8CI51 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pdlim5Q8CI51 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Pdlim5Q8CI51 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.59■■□□□ 1.05
Pdlim5Q8CI51 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Pdlim5Q8CI51 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pdlim5Q8CI51 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pdlim5Q8CI51 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pdlim5Q8CI51 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pdlim5Q8CI51 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pdlim5Q8CI51 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Pdlim5Q8CI51 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Pdlim5Q8CI51 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pdlim5Q8CI51 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pdlim5Q8CI51 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pdlim5Q8CI51 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pdlim5Q8CI51 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Pdlim5Q8CI51 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pdlim5Q8CI51 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pdlim5Q8CI51 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.55■■□□□ 1.04
Pdlim5Q8CI51 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pdlim5Q8CI51 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.55■■□□□ 1.04
Pdlim5Q8CI51 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pdlim5Q8CI51 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.55■■□□□ 1.04
Pdlim5Q8CI51 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pdlim5Q8CI51 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pdlim5Q8CI51 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.54■■□□□ 1.04
Pdlim5Q8CI51 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pdlim5Q8CI51 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pdlim5Q8CI51 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pdlim5Q8CI51 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pdlim5Q8CI51 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pdlim5Q8CI51 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.53■■□□□ 1.04
Pdlim5Q8CI51 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pdlim5Q8CI51 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Pdlim5Q8CI51 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pdlim5Q8CI51 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pdlim5Q8CI51 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pdlim5Q8CI51 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pdlim5Q8CI51 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pdlim5Q8CI51 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pdlim5Q8CI51 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pdlim5Q8CI51 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pdlim5Q8CI51 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pdlim5Q8CI51 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pdlim5Q8CI51 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Pdlim5Q8CI51 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Pdlim5Q8CI51 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Pdlim5Q8CI51 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pdlim5Q8CI51 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pdlim5Q8CI51 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pdlim5Q8CI51 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Pdlim5Q8CI51 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pdlim5Q8CI51 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.48■■□□□ 1.03
Pdlim5Q8CI51 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Pdlim5Q8CI51 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.46■■□□□ 1.03
Pdlim5Q8CI51 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pdlim5Q8CI51 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pdlim5Q8CI51 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pdlim5Q8CI51 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pdlim5Q8CI51 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pdlim5Q8CI51 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms