Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC27.88■■■□□ 2.05
Rbm28Q8CGC6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Rbm28Q8CGC6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Rbm28Q8CGC6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Rbm28Q8CGC6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
Rbm28Q8CGC6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
Rbm28Q8CGC6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
Rbm28Q8CGC6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Rbm28Q8CGC6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Rbm28Q8CGC6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
Rbm28Q8CGC6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
Rbm28Q8CGC6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
Rbm28Q8CGC6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Rbm28Q8CGC6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rbm28Q8CGC6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Rbm28Q8CGC6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rbm28Q8CGC6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rbm28Q8CGC6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rbm28Q8CGC6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Rbm28Q8CGC6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
Rbm28Q8CGC6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Rbm28Q8CGC6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC27.78■■■□□ 2.04
Rbm28Q8CGC6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.78■■■□□ 2.04
Rbm28Q8CGC6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rbm28Q8CGC6 Gm11175-201ENSMUST00000116172 543 ntBASIC27.77■■■□□ 2.04
Rbm28Q8CGC6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Rbm28Q8CGC6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Rbm28Q8CGC6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rbm28Q8CGC6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.76■■■□□ 2.03
Rbm28Q8CGC6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
Rbm28Q8CGC6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Rbm28Q8CGC6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Rbm28Q8CGC6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
Rbm28Q8CGC6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
Rbm28Q8CGC6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Rbm28Q8CGC6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Rbm28Q8CGC6 Mir6538-201ENSMUST00000183713 110 ntBASIC27.72■■■□□ 2.03
Rbm28Q8CGC6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.71■■■□□ 2.03
Rbm28Q8CGC6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Rbm28Q8CGC6 Gm6311-201ENSMUST00000073790 878 ntBASIC27.71■■■□□ 2.03
Rbm28Q8CGC6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Rbm28Q8CGC6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
Rbm28Q8CGC6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Rbm28Q8CGC6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Rbm28Q8CGC6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Rbm28Q8CGC6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
Rbm28Q8CGC6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Rbm28Q8CGC6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Rbm28Q8CGC6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Rbm28Q8CGC6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Rbm28Q8CGC6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rbm28Q8CGC6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.67■■■□□ 2.02
Rbm28Q8CGC6 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.67■■■□□ 2.02
Rbm28Q8CGC6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC27.66■■■□□ 2.02
Rbm28Q8CGC6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Rbm28Q8CGC6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
Rbm28Q8CGC6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
Rbm28Q8CGC6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.62■■■□□ 2.01
Rbm28Q8CGC6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27.62■■■□□ 2.01
Rbm28Q8CGC6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Rbm28Q8CGC6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
Rbm28Q8CGC6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC27.59■■■□□ 2.01
Rbm28Q8CGC6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Rbm28Q8CGC6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.59■■■□□ 2.01
Rbm28Q8CGC6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
Rbm28Q8CGC6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Rbm28Q8CGC6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Rbm28Q8CGC6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rbm28Q8CGC6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Rbm28Q8CGC6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.57■■■□□ 2
Rbm28Q8CGC6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Rbm28Q8CGC6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.56■■■□□ 2
Rbm28Q8CGC6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC27.56■■■□□ 2
Rbm28Q8CGC6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
Rbm28Q8CGC6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Rbm28Q8CGC6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.55■■■□□ 2
Rbm28Q8CGC6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
Rbm28Q8CGC6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Rbm28Q8CGC6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Rbm28Q8CGC6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Rbm28Q8CGC6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Rbm28Q8CGC6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Rbm28Q8CGC6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Rbm28Q8CGC6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rbm28Q8CGC6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rbm28Q8CGC6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rbm28Q8CGC6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rbm28Q8CGC6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rbm28Q8CGC6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rbm28Q8CGC6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Rbm28Q8CGC6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Rbm28Q8CGC6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.48■■□□□ 1.99
Rbm28Q8CGC6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Rbm28Q8CGC6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Rbm28Q8CGC6 Gm37136-201ENSMUST00000194368 194 ntBASIC27.47■■□□□ 1.99
Rbm28Q8CGC6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Rbm28Q8CGC6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.47■■□□□ 1.99
Rbm28Q8CGC6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rbm28Q8CGC6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rbm28Q8CGC6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms