Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Scfd1Q8BRF7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Scfd1Q8BRF7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.44■■□□□ 1.98
Scfd1Q8BRF7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
Scfd1Q8BRF7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.44■■□□□ 1.98
Scfd1Q8BRF7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
Scfd1Q8BRF7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Scfd1Q8BRF7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
Scfd1Q8BRF7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Scfd1Q8BRF7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Scfd1Q8BRF7 Gm6311-201ENSMUST00000073790 878 ntBASIC27.39■■□□□ 1.98
Scfd1Q8BRF7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Scfd1Q8BRF7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.39■■□□□ 1.97
Scfd1Q8BRF7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Scfd1Q8BRF7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC27.37■■□□□ 1.97
Scfd1Q8BRF7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
Scfd1Q8BRF7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Scfd1Q8BRF7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Scfd1Q8BRF7 Gm11175-201ENSMUST00000116172 543 ntBASIC27.36■■□□□ 1.97
Scfd1Q8BRF7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Scfd1Q8BRF7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Scfd1Q8BRF7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.35■■□□□ 1.97
Scfd1Q8BRF7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Scfd1Q8BRF7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.34■■□□□ 1.97
Scfd1Q8BRF7 Gm37136-201ENSMUST00000194368 194 ntBASIC27.34■■□□□ 1.97
Scfd1Q8BRF7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.33■■□□□ 1.97
Scfd1Q8BRF7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Scfd1Q8BRF7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Scfd1Q8BRF7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
Scfd1Q8BRF7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Scfd1Q8BRF7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27.32■■□□□ 1.96
Scfd1Q8BRF7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.31■■□□□ 1.96
Scfd1Q8BRF7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Scfd1Q8BRF7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
Scfd1Q8BRF7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Scfd1Q8BRF7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC27.3■■□□□ 1.96
Scfd1Q8BRF7 Mir6538-201ENSMUST00000183713 110 ntBASIC27.29■■□□□ 1.96
Scfd1Q8BRF7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Scfd1Q8BRF7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC27.28■■□□□ 1.96
Scfd1Q8BRF7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Scfd1Q8BRF7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Scfd1Q8BRF7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Scfd1Q8BRF7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Scfd1Q8BRF7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Scfd1Q8BRF7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Scfd1Q8BRF7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Scfd1Q8BRF7 Gm4799-201ENSMUST00000095396 657 ntBASIC27.25■■□□□ 1.95
Scfd1Q8BRF7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Scfd1Q8BRF7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Scfd1Q8BRF7 Amer2-203ENSMUST00000225247 2662 ntBASIC27.23■■□□□ 1.95
Scfd1Q8BRF7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Scfd1Q8BRF7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC27.23■■□□□ 1.95
Scfd1Q8BRF7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
Scfd1Q8BRF7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Scfd1Q8BRF7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Scfd1Q8BRF7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Scfd1Q8BRF7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Scfd1Q8BRF7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Scfd1Q8BRF7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Scfd1Q8BRF7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.21■■□□□ 1.95
Scfd1Q8BRF7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.21■■□□□ 1.95
Scfd1Q8BRF7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Scfd1Q8BRF7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Scfd1Q8BRF7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Scfd1Q8BRF7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Scfd1Q8BRF7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Scfd1Q8BRF7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.19■■□□□ 1.94
Scfd1Q8BRF7 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.19■■□□□ 1.94
Scfd1Q8BRF7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Scfd1Q8BRF7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
Scfd1Q8BRF7 Mir3960-201ENSMUST00000198213 73 ntBASIC27.17■■□□□ 1.94
Scfd1Q8BRF7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Scfd1Q8BRF7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Scfd1Q8BRF7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Scfd1Q8BRF7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Scfd1Q8BRF7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Scfd1Q8BRF7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Scfd1Q8BRF7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Scfd1Q8BRF7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.12■■□□□ 1.93
Scfd1Q8BRF7 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.11■■□□□ 1.93
Scfd1Q8BRF7 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.11■■□□□ 1.93
Scfd1Q8BRF7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Scfd1Q8BRF7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Scfd1Q8BRF7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Scfd1Q8BRF7 Gm45364-201ENSMUST00000210883 159 ntBASIC27.09■■□□□ 1.93
Scfd1Q8BRF7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Scfd1Q8BRF7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Scfd1Q8BRF7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Scfd1Q8BRF7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC27.09■■□□□ 1.93
Scfd1Q8BRF7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Scfd1Q8BRF7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Scfd1Q8BRF7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Scfd1Q8BRF7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
Scfd1Q8BRF7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Scfd1Q8BRF7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Scfd1Q8BRF7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Scfd1Q8BRF7 Scarna2-201ENSMUST00000157560 414 ntBASIC27.05■■□□□ 1.92
Scfd1Q8BRF7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Scfd1Q8BRF7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Scfd1Q8BRF7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms