Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Smg1Q8BKX6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smg1Q8BKX6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smg1Q8BKX6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smg1Q8BKX6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smg1Q8BKX6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smg1Q8BKX6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.59■□□□□ 0.89
Smg1Q8BKX6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smg1Q8BKX6 Particl-201ENSMUST00000205370 1560 ntBASIC20.58■□□□□ 0.89
Smg1Q8BKX6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.58■□□□□ 0.88
Smg1Q8BKX6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smg1Q8BKX6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smg1Q8BKX6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smg1Q8BKX6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smg1Q8BKX6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Smg1Q8BKX6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smg1Q8BKX6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smg1Q8BKX6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.56■□□□□ 0.88
Smg1Q8BKX6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smg1Q8BKX6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smg1Q8BKX6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smg1Q8BKX6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Smg1Q8BKX6 Gm15546-201ENSMUST00000122095 826 ntBASIC20.55■□□□□ 0.88
Smg1Q8BKX6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.54■□□□□ 0.88
Smg1Q8BKX6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smg1Q8BKX6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smg1Q8BKX6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.54■□□□□ 0.88
Smg1Q8BKX6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smg1Q8BKX6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.53■□□□□ 0.88
Smg1Q8BKX6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smg1Q8BKX6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smg1Q8BKX6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Smg1Q8BKX6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.53■□□□□ 0.88
Smg1Q8BKX6 Gm5921-201ENSMUST00000075898 882 ntBASIC20.53■□□□□ 0.88
Smg1Q8BKX6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smg1Q8BKX6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smg1Q8BKX6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg1Q8BKX6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg1Q8BKX6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smg1Q8BKX6 Gm27502-201ENSMUST00000183495 199 ntBASIC20.52■□□□□ 0.88
Smg1Q8BKX6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smg1Q8BKX6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smg1Q8BKX6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Smg1Q8BKX6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.5■□□□□ 0.87
Smg1Q8BKX6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smg1Q8BKX6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smg1Q8BKX6 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.49■□□□□ 0.87
Smg1Q8BKX6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smg1Q8BKX6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smg1Q8BKX6 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.48■□□□□ 0.87
Smg1Q8BKX6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.48■□□□□ 0.87
Smg1Q8BKX6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smg1Q8BKX6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smg1Q8BKX6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smg1Q8BKX6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smg1Q8BKX6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.46■□□□□ 0.87
Smg1Q8BKX6 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.46■□□□□ 0.87
Smg1Q8BKX6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smg1Q8BKX6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smg1Q8BKX6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smg1Q8BKX6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Smg1Q8BKX6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smg1Q8BKX6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.45■□□□□ 0.86
Smg1Q8BKX6 Gm45364-201ENSMUST00000210883 159 ntBASIC20.45■□□□□ 0.86
Smg1Q8BKX6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smg1Q8BKX6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smg1Q8BKX6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smg1Q8BKX6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smg1Q8BKX6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Smg1Q8BKX6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Smg1Q8BKX6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smg1Q8BKX6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smg1Q8BKX6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smg1Q8BKX6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.41■□□□□ 0.86
Smg1Q8BKX6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smg1Q8BKX6 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.4■□□□□ 0.86
Smg1Q8BKX6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.4■□□□□ 0.86
Smg1Q8BKX6 Gm15820-201ENSMUST00000201566 728 ntBASIC20.4■□□□□ 0.86
Smg1Q8BKX6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smg1Q8BKX6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.39■□□□□ 0.86
Smg1Q8BKX6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smg1Q8BKX6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smg1Q8BKX6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Smg1Q8BKX6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Smg1Q8BKX6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smg1Q8BKX6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smg1Q8BKX6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smg1Q8BKX6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smg1Q8BKX6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smg1Q8BKX6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smg1Q8BKX6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smg1Q8BKX6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smg1Q8BKX6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Smg1Q8BKX6 Serp2-204ENSMUST00000228055 705 ntBASIC20.36■□□□□ 0.85
Smg1Q8BKX6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smg1Q8BKX6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smg1Q8BKX6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smg1Q8BKX6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smg1Q8BKX6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smg1Q8BKX6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms