Protein–RNA interactions for Protein: Q810F0

Prima1, Proline-rich membrane anchor 1, mousemouse

Predictions only

Length 153 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prima1Q810F0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Prima1Q810F0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prima1Q810F0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Prima1Q810F0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prima1Q810F0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prima1Q810F0 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.51■□□□□ 0.87
Prima1Q810F0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Prima1Q810F0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prima1Q810F0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prima1Q810F0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prima1Q810F0 Gm30023-201ENSMUST00000197970 889 ntBASIC20.48■□□□□ 0.87
Prima1Q810F0 Gm45364-201ENSMUST00000210883 159 ntBASIC20.48■□□□□ 0.87
Prima1Q810F0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prima1Q810F0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Prima1Q810F0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prima1Q810F0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Prima1Q810F0 Mir3960-201ENSMUST00000198213 73 ntBASIC20.47■□□□□ 0.87
Prima1Q810F0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.47■□□□□ 0.87
Prima1Q810F0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prima1Q810F0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prima1Q810F0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Prima1Q810F0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Prima1Q810F0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prima1Q810F0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.45■□□□□ 0.86
Prima1Q810F0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Prima1Q810F0 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.45■□□□□ 0.86
Prima1Q810F0 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.45■□□□□ 0.86
Prima1Q810F0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.45■□□□□ 0.86
Prima1Q810F0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Prima1Q810F0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prima1Q810F0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.44■□□□□ 0.86
Prima1Q810F0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.44■□□□□ 0.86
Prima1Q810F0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prima1Q810F0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Prima1Q810F0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Prima1Q810F0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.43■□□□□ 0.86
Prima1Q810F0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prima1Q810F0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prima1Q810F0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prima1Q810F0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prima1Q810F0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prima1Q810F0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.41■□□□□ 0.86
Prima1Q810F0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prima1Q810F0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.4■□□□□ 0.86
Prima1Q810F0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Prima1Q810F0 Gm10420-201ENSMUST00000121713 882 ntBASIC20.39■□□□□ 0.85
Prima1Q810F0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prima1Q810F0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Prima1Q810F0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prima1Q810F0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prima1Q810F0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prima1Q810F0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Prima1Q810F0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.37■□□□□ 0.85
Prima1Q810F0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prima1Q810F0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.37■□□□□ 0.85
Prima1Q810F0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Prima1Q810F0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prima1Q810F0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prima1Q810F0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prima1Q810F0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Prima1Q810F0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Prima1Q810F0 Rps24-207ENSMUST00000224568 714 ntBASIC20.35■□□□□ 0.85
Prima1Q810F0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prima1Q810F0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prima1Q810F0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prima1Q810F0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.34■□□□□ 0.85
Prima1Q810F0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prima1Q810F0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Prima1Q810F0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Prima1Q810F0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.33■□□□□ 0.85
Prima1Q810F0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prima1Q810F0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prima1Q810F0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.32■□□□□ 0.84
Prima1Q810F0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Prima1Q810F0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.31■□□□□ 0.84
Prima1Q810F0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Prima1Q810F0 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.31■□□□□ 0.84
Prima1Q810F0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prima1Q810F0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prima1Q810F0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prima1Q810F0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prima1Q810F0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prima1Q810F0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Prima1Q810F0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.28■□□□□ 0.84
Prima1Q810F0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Prima1Q810F0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Prima1Q810F0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Prima1Q810F0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Prima1Q810F0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.26■□□□□ 0.83
Prima1Q810F0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prima1Q810F0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prima1Q810F0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prima1Q810F0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Prima1Q810F0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prima1Q810F0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prima1Q810F0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.24■□□□□ 0.83
Prima1Q810F0 Gm15820-201ENSMUST00000201566 728 ntBASIC20.24■□□□□ 0.83
Prima1Q810F0 Serp2-204ENSMUST00000228055 705 ntBASIC20.24■□□□□ 0.83
Prima1Q810F0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prima1Q810F0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms