Protein–RNA interactions for Protein: Q80ZA4

Pkhd1l1, Fibrocystin-L, mousemouse

Predictions only

Length 4,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkhd1l1Q80ZA4 Pcf11-205ENSMUST00000208255 1720 ntBASIC14.58□□□□□ -0.08
Pkhd1l1Q80ZA4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pkhd1l1Q80ZA4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pkhd1l1Q80ZA4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pkhd1l1Q80ZA4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC14.57□□□□□ -0.08
Pkhd1l1Q80ZA4 Gm7332-201ENSMUST00000118351 454 ntBASIC14.56□□□□□ -0.08
Pkhd1l1Q80ZA4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pkhd1l1Q80ZA4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pkhd1l1Q80ZA4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.54□□□□□ -0.08
Pkhd1l1Q80ZA4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pkhd1l1Q80ZA4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Pkhd1l1Q80ZA4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pkhd1l1Q80ZA4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pkhd1l1Q80ZA4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pkhd1l1Q80ZA4 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.53□□□□□ -0.08
Pkhd1l1Q80ZA4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pkhd1l1Q80ZA4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pkhd1l1Q80ZA4 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.53□□□□□ -0.08
Pkhd1l1Q80ZA4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pkhd1l1Q80ZA4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pkhd1l1Q80ZA4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pkhd1l1Q80ZA4 Mir3960-201ENSMUST00000198213 73 ntBASIC14.52□□□□□ -0.08
Pkhd1l1Q80ZA4 Gm14523-201ENSMUST00000117260 558 ntBASIC14.52□□□□□ -0.09
Pkhd1l1Q80ZA4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pkhd1l1Q80ZA4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pkhd1l1Q80ZA4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pkhd1l1Q80ZA4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pkhd1l1Q80ZA4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pkhd1l1Q80ZA4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pkhd1l1Q80ZA4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Pkhd1l1Q80ZA4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pkhd1l1Q80ZA4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pkhd1l1Q80ZA4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.5□□□□□ -0.09
Pkhd1l1Q80ZA4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pkhd1l1Q80ZA4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pkhd1l1Q80ZA4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC14.49□□□□□ -0.09
Pkhd1l1Q80ZA4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkhd1l1Q80ZA4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pkhd1l1Q80ZA4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkhd1l1Q80ZA4 AC154454.1-201ENSMUST00000225253 216 ntBASIC14.49□□□□□ -0.09
Pkhd1l1Q80ZA4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkhd1l1Q80ZA4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pkhd1l1Q80ZA4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC14.49□□□□□ -0.09
Pkhd1l1Q80ZA4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pkhd1l1Q80ZA4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.48□□□□□ -0.09
Pkhd1l1Q80ZA4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pkhd1l1Q80ZA4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pkhd1l1Q80ZA4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pkhd1l1Q80ZA4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkhd1l1Q80ZA4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkhd1l1Q80ZA4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pkhd1l1Q80ZA4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pkhd1l1Q80ZA4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pkhd1l1Q80ZA4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pkhd1l1Q80ZA4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC14.46□□□□□ -0.09
Pkhd1l1Q80ZA4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pkhd1l1Q80ZA4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pkhd1l1Q80ZA4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pkhd1l1Q80ZA4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pkhd1l1Q80ZA4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pkhd1l1Q80ZA4 Gm13889-201ENSMUST00000099689 1386 ntBASIC14.46□□□□□ -0.1
Pkhd1l1Q80ZA4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.45□□□□□ -0.1
Pkhd1l1Q80ZA4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pkhd1l1Q80ZA4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pkhd1l1Q80ZA4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pkhd1l1Q80ZA4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pkhd1l1Q80ZA4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pkhd1l1Q80ZA4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pkhd1l1Q80ZA4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC14.44□□□□□ -0.1
Pkhd1l1Q80ZA4 Gm9905-201ENSMUST00000065740 1845 ntBASIC14.44□□□□□ -0.1
Pkhd1l1Q80ZA4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.44□□□□□ -0.1
Pkhd1l1Q80ZA4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pkhd1l1Q80ZA4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pkhd1l1Q80ZA4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pkhd1l1Q80ZA4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC14.43□□□□□ -0.1
Pkhd1l1Q80ZA4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pkhd1l1Q80ZA4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.42□□□□□ -0.1
Pkhd1l1Q80ZA4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pkhd1l1Q80ZA4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.42□□□□□ -0.1
Pkhd1l1Q80ZA4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC14.42□□□□□ -0.1
Pkhd1l1Q80ZA4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.42□□□□□ -0.1
Pkhd1l1Q80ZA4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pkhd1l1Q80ZA4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkhd1l1Q80ZA4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkhd1l1Q80ZA4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkhd1l1Q80ZA4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pkhd1l1Q80ZA4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pkhd1l1Q80ZA4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pkhd1l1Q80ZA4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pkhd1l1Q80ZA4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC14.41□□□□□ -0.1
Pkhd1l1Q80ZA4 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.4□□□□□ -0.1
Pkhd1l1Q80ZA4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkhd1l1Q80ZA4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pkhd1l1Q80ZA4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pkhd1l1Q80ZA4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.39□□□□□ -0.11
Pkhd1l1Q80ZA4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pkhd1l1Q80ZA4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC14.39□□□□□ -0.11
Pkhd1l1Q80ZA4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pkhd1l1Q80ZA4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pkhd1l1Q80ZA4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms