Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Sh3tc2Q80VA5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Sh3tc2Q80VA5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Sh3tc2Q80VA5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Sh3tc2Q80VA5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Sh3tc2Q80VA5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.75■■□□□ 1.71
Sh3tc2Q80VA5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Sh3tc2Q80VA5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Sh3tc2Q80VA5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
Sh3tc2Q80VA5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Sh3tc2Q80VA5 Amer2-203ENSMUST00000225247 2662 ntBASIC25.72■■□□□ 1.71
Sh3tc2Q80VA5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sh3tc2Q80VA5 Gm11687-201ENSMUST00000118911 886 ntBASIC25.71■■□□□ 1.71
Sh3tc2Q80VA5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Sh3tc2Q80VA5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Sh3tc2Q80VA5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Sh3tc2Q80VA5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
Sh3tc2Q80VA5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Sh3tc2Q80VA5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.7■■□□□ 1.7
Sh3tc2Q80VA5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.7■■□□□ 1.7
Sh3tc2Q80VA5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Sh3tc2Q80VA5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.69■■□□□ 1.7
Sh3tc2Q80VA5 Gm12366-201ENSMUST00000121722 873 ntBASIC25.69■■□□□ 1.7
Sh3tc2Q80VA5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.69■■□□□ 1.7
Sh3tc2Q80VA5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sh3tc2Q80VA5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sh3tc2Q80VA5 Gm9806-201ENSMUST00000051080 552 ntBASIC25.69■■□□□ 1.7
Sh3tc2Q80VA5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.69■■□□□ 1.7
Sh3tc2Q80VA5 Gm5786-201ENSMUST00000085368 882 ntBASIC25.69■■□□□ 1.7
Sh3tc2Q80VA5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.68■■□□□ 1.7
Sh3tc2Q80VA5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Sh3tc2Q80VA5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Sh3tc2Q80VA5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sh3tc2Q80VA5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sh3tc2Q80VA5 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Sh3tc2Q80VA5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25.67■■□□□ 1.7
Sh3tc2Q80VA5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Sh3tc2Q80VA5 Gm4799-201ENSMUST00000095396 657 ntBASIC25.67■■□□□ 1.7
Sh3tc2Q80VA5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Sh3tc2Q80VA5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Sh3tc2Q80VA5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.66■■□□□ 1.7
Sh3tc2Q80VA5 Gm16437-201ENSMUST00000025669 507 ntBASIC25.66■■□□□ 1.7
Sh3tc2Q80VA5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Sh3tc2Q80VA5 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.66■■□□□ 1.7
Sh3tc2Q80VA5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Sh3tc2Q80VA5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sh3tc2Q80VA5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sh3tc2Q80VA5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.65■■□□□ 1.7
Sh3tc2Q80VA5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
Sh3tc2Q80VA5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Sh3tc2Q80VA5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Sh3tc2Q80VA5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Sh3tc2Q80VA5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sh3tc2Q80VA5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.6■■□□□ 1.69
Sh3tc2Q80VA5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Sh3tc2Q80VA5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Sh3tc2Q80VA5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Sh3tc2Q80VA5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Sh3tc2Q80VA5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Sh3tc2Q80VA5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.58■■□□□ 1.69
Sh3tc2Q80VA5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.68
Sh3tc2Q80VA5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Sh3tc2Q80VA5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Sh3tc2Q80VA5 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.57■■□□□ 1.68
Sh3tc2Q80VA5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sh3tc2Q80VA5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sh3tc2Q80VA5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
Sh3tc2Q80VA5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Sh3tc2Q80VA5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Sh3tc2Q80VA5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.56■■□□□ 1.68
Sh3tc2Q80VA5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Sh3tc2Q80VA5 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.54■■□□□ 1.68
Sh3tc2Q80VA5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Sh3tc2Q80VA5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.53■■□□□ 1.68
Sh3tc2Q80VA5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Sh3tc2Q80VA5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Sh3tc2Q80VA5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
Sh3tc2Q80VA5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25.53■■□□□ 1.68
Sh3tc2Q80VA5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Sh3tc2Q80VA5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sh3tc2Q80VA5 Gm27502-201ENSMUST00000183495 199 ntBASIC25.51■■□□□ 1.67
Sh3tc2Q80VA5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sh3tc2Q80VA5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sh3tc2Q80VA5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sh3tc2Q80VA5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sh3tc2Q80VA5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.51■■□□□ 1.67
Sh3tc2Q80VA5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sh3tc2Q80VA5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.5■■□□□ 1.67
Sh3tc2Q80VA5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Sh3tc2Q80VA5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Sh3tc2Q80VA5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Sh3tc2Q80VA5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sh3tc2Q80VA5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.49■■□□□ 1.67
Sh3tc2Q80VA5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Sh3tc2Q80VA5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Sh3tc2Q80VA5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
Sh3tc2Q80VA5 AC154454.1-201ENSMUST00000225253 216 ntBASIC25.48■■□□□ 1.67
Sh3tc2Q80VA5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Sh3tc2Q80VA5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Sh3tc2Q80VA5 Mir3960-201ENSMUST00000198213 73 ntBASIC25.47■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms