Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25,74■■□□□ 1,71
Sh3d21Q7TSG5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25,71■■□□□ 1,71
Sh3d21Q7TSG5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25,69■■□□□ 1,7
Sh3d21Q7TSG5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25,69■■□□□ 1,7
Sh3d21Q7TSG5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25,69■■□□□ 1,7
Sh3d21Q7TSG5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25,68■■□□□ 1,7
Sh3d21Q7TSG5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25,68■■□□□ 1,7
Sh3d21Q7TSG5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25,68■■□□□ 1,7
Sh3d21Q7TSG5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25,68■■□□□ 1,7
Sh3d21Q7TSG5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25,67■■□□□ 1,7
Sh3d21Q7TSG5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC25,66■■□□□ 1,7
Sh3d21Q7TSG5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25,66■■□□□ 1,7
Sh3d21Q7TSG5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25,66■■□□□ 1,7
Sh3d21Q7TSG5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25,66■■□□□ 1,7
Sh3d21Q7TSG5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25,66■■□□□ 1,7
Sh3d21Q7TSG5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25,65■■□□□ 1,7
Sh3d21Q7TSG5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25,64■■□□□ 1,7
Sh3d21Q7TSG5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25,64■■□□□ 1,69
Sh3d21Q7TSG5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25,64■■□□□ 1,69
Sh3d21Q7TSG5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC25,63■■□□□ 1,69
Sh3d21Q7TSG5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25,63■■□□□ 1,69
Sh3d21Q7TSG5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25,63■■□□□ 1,69
Sh3d21Q7TSG5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25,63■■□□□ 1,69
Sh3d21Q7TSG5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25,63■■□□□ 1,69
Sh3d21Q7TSG5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25,62■■□□□ 1,69
Sh3d21Q7TSG5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25,62■■□□□ 1,69
Sh3d21Q7TSG5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25,62■■□□□ 1,69
Sh3d21Q7TSG5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25,62■■□□□ 1,69
Sh3d21Q7TSG5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25,61■■□□□ 1,69
Sh3d21Q7TSG5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25,61■■□□□ 1,69
Sh3d21Q7TSG5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC25,61■■□□□ 1,69
Sh3d21Q7TSG5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25,61■■□□□ 1,69
Sh3d21Q7TSG5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25,6■■□□□ 1,69
Sh3d21Q7TSG5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25,6■■□□□ 1,69
Sh3d21Q7TSG5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25,6■■□□□ 1,69
Sh3d21Q7TSG5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC25,6■■□□□ 1,69
Sh3d21Q7TSG5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25,6■■□□□ 1,69
Sh3d21Q7TSG5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC25,59■■□□□ 1,69
Sh3d21Q7TSG5 Gm8503-201ENSMUST00000118131 455 ntBASIC25,59■■□□□ 1,69
Sh3d21Q7TSG5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25,59■■□□□ 1,69
Sh3d21Q7TSG5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25,59■■□□□ 1,69
Sh3d21Q7TSG5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25,58■■□□□ 1,69
Sh3d21Q7TSG5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25,57■■□□□ 1,68
Sh3d21Q7TSG5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25,57■■□□□ 1,68
Sh3d21Q7TSG5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25,57■■□□□ 1,68
Sh3d21Q7TSG5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25,57■■□□□ 1,68
Sh3d21Q7TSG5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25,57■■□□□ 1,68
Sh3d21Q7TSG5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25,56■■□□□ 1,68
Sh3d21Q7TSG5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25,56■■□□□ 1,68
Sh3d21Q7TSG5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC25,56■■□□□ 1,68
Sh3d21Q7TSG5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25,55■■□□□ 1,68
Sh3d21Q7TSG5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25,55■■□□□ 1,68
Sh3d21Q7TSG5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25,55■■□□□ 1,68
Sh3d21Q7TSG5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25,54■■□□□ 1,68
Sh3d21Q7TSG5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25,54■■□□□ 1,68
Sh3d21Q7TSG5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25,54■■□□□ 1,68
Sh3d21Q7TSG5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25,54■■□□□ 1,68
Sh3d21Q7TSG5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25,51■■□□□ 1,67
Sh3d21Q7TSG5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25,51■■□□□ 1,67
Sh3d21Q7TSG5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25,51■■□□□ 1,67
Sh3d21Q7TSG5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25,51■■□□□ 1,67
Sh3d21Q7TSG5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25,5■■□□□ 1,67
Sh3d21Q7TSG5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25,49■■□□□ 1,67
Sh3d21Q7TSG5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25,48■■□□□ 1,67
Sh3d21Q7TSG5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25,48■■□□□ 1,67
Sh3d21Q7TSG5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25,47■■□□□ 1,67
Sh3d21Q7TSG5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25,46■■□□□ 1,67
Sh3d21Q7TSG5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25,46■■□□□ 1,67
Sh3d21Q7TSG5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25,45■■□□□ 1,67
Sh3d21Q7TSG5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25,45■■□□□ 1,66
Sh3d21Q7TSG5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25,45■■□□□ 1,66
Sh3d21Q7TSG5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,66
Sh3d21Q7TSG5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,66
Sh3d21Q7TSG5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Sh3d21Q7TSG5 Gm37847-201ENSMUST00000192163 1497 ntBASIC25,44■■□□□ 1,66
Sh3d21Q7TSG5 Gm31748-201ENSMUST00000194938 1497 ntBASIC25,44■■□□□ 1,66
Sh3d21Q7TSG5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Sh3d21Q7TSG5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25,43■■□□□ 1,66
Sh3d21Q7TSG5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25,43■■□□□ 1,66
Sh3d21Q7TSG5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25,43■■□□□ 1,66
Sh3d21Q7TSG5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25,42■■□□□ 1,66
Sh3d21Q7TSG5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25,42■■□□□ 1,66
Sh3d21Q7TSG5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25,42■■□□□ 1,66
Sh3d21Q7TSG5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25,42■■□□□ 1,66
Sh3d21Q7TSG5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
Sh3d21Q7TSG5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Sh3d21Q7TSG5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Sh3d21Q7TSG5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25,4■■□□□ 1,66
Sh3d21Q7TSG5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC25,4■■□□□ 1,66
Sh3d21Q7TSG5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25,39■■□□□ 1,66
Sh3d21Q7TSG5 Particl-201ENSMUST00000205370 1560 ntBASIC25,39■■□□□ 1,65
Sh3d21Q7TSG5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25,39■■□□□ 1,65
Sh3d21Q7TSG5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25,38■■□□□ 1,65
Sh3d21Q7TSG5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Sh3d21Q7TSG5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25,38■■□□□ 1,65
Sh3d21Q7TSG5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC25,38■■□□□ 1,65
Sh3d21Q7TSG5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25,38■■□□□ 1,65
Sh3d21Q7TSG5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25,37■■□□□ 1,65
Sh3d21Q7TSG5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25,37■■□□□ 1,65
Sh3d21Q7TSG5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Retrieved 100 of 76,532 protein–RNA pairs in 8,7 ms