Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Exosc3Q7TQK4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Exosc3Q7TQK4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Exosc3Q7TQK4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Exosc3Q7TQK4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Exosc3Q7TQK4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.75■■□□□ 1.07
Exosc3Q7TQK4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Exosc3Q7TQK4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Exosc3Q7TQK4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Exosc3Q7TQK4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Exosc3Q7TQK4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Exosc3Q7TQK4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Exosc3Q7TQK4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Exosc3Q7TQK4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Exosc3Q7TQK4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Exosc3Q7TQK4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Exosc3Q7TQK4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Exosc3Q7TQK4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Exosc3Q7TQK4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Exosc3Q7TQK4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Exosc3Q7TQK4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Exosc3Q7TQK4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.69■■□□□ 1.06
Exosc3Q7TQK4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Exosc3Q7TQK4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Exosc3Q7TQK4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Exosc3Q7TQK4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Exosc3Q7TQK4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Exosc3Q7TQK4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Exosc3Q7TQK4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Exosc3Q7TQK4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Exosc3Q7TQK4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Exosc3Q7TQK4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Exosc3Q7TQK4 Particl-201ENSMUST00000205370 1560 ntBASIC21.65■■□□□ 1.06
Exosc3Q7TQK4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Exosc3Q7TQK4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Exosc3Q7TQK4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Exosc3Q7TQK4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Exosc3Q7TQK4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.63■■□□□ 1.05
Exosc3Q7TQK4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Exosc3Q7TQK4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Exosc3Q7TQK4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Exosc3Q7TQK4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Exosc3Q7TQK4 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.61■■□□□ 1.05
Exosc3Q7TQK4 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.61■■□□□ 1.05
Exosc3Q7TQK4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.61■■□□□ 1.05
Exosc3Q7TQK4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Exosc3Q7TQK4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Exosc3Q7TQK4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.6■■□□□ 1.05
Exosc3Q7TQK4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Exosc3Q7TQK4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Exosc3Q7TQK4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Exosc3Q7TQK4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Exosc3Q7TQK4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.59■■□□□ 1.05
Exosc3Q7TQK4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
Exosc3Q7TQK4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Exosc3Q7TQK4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Exosc3Q7TQK4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Exosc3Q7TQK4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Exosc3Q7TQK4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.58■■□□□ 1.05
Exosc3Q7TQK4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Exosc3Q7TQK4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Exosc3Q7TQK4 Gm7432-201ENSMUST00000210343 879 ntBASIC21.57■■□□□ 1.04
Exosc3Q7TQK4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Exosc3Q7TQK4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Exosc3Q7TQK4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Exosc3Q7TQK4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Exosc3Q7TQK4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.56■■□□□ 1.04
Exosc3Q7TQK4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Exosc3Q7TQK4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Exosc3Q7TQK4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Exosc3Q7TQK4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Exosc3Q7TQK4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Exosc3Q7TQK4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Exosc3Q7TQK4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Exosc3Q7TQK4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Exosc3Q7TQK4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Exosc3Q7TQK4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Exosc3Q7TQK4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Exosc3Q7TQK4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Exosc3Q7TQK4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Exosc3Q7TQK4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Exosc3Q7TQK4 Gm37136-201ENSMUST00000194368 194 ntBASIC21.5■■□□□ 1.03
Exosc3Q7TQK4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Exosc3Q7TQK4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Exosc3Q7TQK4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Exosc3Q7TQK4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Exosc3Q7TQK4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.49■■□□□ 1.03
Exosc3Q7TQK4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Exosc3Q7TQK4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Exosc3Q7TQK4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Exosc3Q7TQK4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Exosc3Q7TQK4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Exosc3Q7TQK4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Exosc3Q7TQK4 Gm11599-201ENSMUST00000118720 878 ntBASIC21.46■■□□□ 1.03
Exosc3Q7TQK4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.46■■□□□ 1.03
Exosc3Q7TQK4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Exosc3Q7TQK4 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.45■■□□□ 1.02
Exosc3Q7TQK4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Exosc3Q7TQK4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.44■■□□□ 1.02
Exosc3Q7TQK4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms