Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Slc46a1Q6PEM8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc46a1Q6PEM8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.7■□□□□ 0.9
Slc46a1Q6PEM8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Slc46a1Q6PEM8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc46a1Q6PEM8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc46a1Q6PEM8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc46a1Q6PEM8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc46a1Q6PEM8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Slc46a1Q6PEM8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc46a1Q6PEM8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc46a1Q6PEM8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Slc46a1Q6PEM8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Slc46a1Q6PEM8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc46a1Q6PEM8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Slc46a1Q6PEM8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.65■□□□□ 0.9
Slc46a1Q6PEM8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc46a1Q6PEM8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Slc46a1Q6PEM8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Slc46a1Q6PEM8 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.65■□□□□ 0.9
Slc46a1Q6PEM8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Slc46a1Q6PEM8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Slc46a1Q6PEM8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc46a1Q6PEM8 Gm6311-201ENSMUST00000073790 878 ntBASIC20.63■□□□□ 0.89
Slc46a1Q6PEM8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc46a1Q6PEM8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc46a1Q6PEM8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc46a1Q6PEM8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Slc46a1Q6PEM8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc46a1Q6PEM8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc46a1Q6PEM8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc46a1Q6PEM8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.61■□□□□ 0.89
Slc46a1Q6PEM8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc46a1Q6PEM8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc46a1Q6PEM8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.61■□□□□ 0.89
Slc46a1Q6PEM8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.6■□□□□ 0.89
Slc46a1Q6PEM8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc46a1Q6PEM8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc46a1Q6PEM8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slc46a1Q6PEM8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc46a1Q6PEM8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Slc46a1Q6PEM8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc46a1Q6PEM8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc46a1Q6PEM8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc46a1Q6PEM8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc46a1Q6PEM8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc46a1Q6PEM8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Slc46a1Q6PEM8 Gm11175-201ENSMUST00000116172 543 ntBASIC20.58■□□□□ 0.89
Slc46a1Q6PEM8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc46a1Q6PEM8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc46a1Q6PEM8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc46a1Q6PEM8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Slc46a1Q6PEM8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Slc46a1Q6PEM8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc46a1Q6PEM8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
Slc46a1Q6PEM8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc46a1Q6PEM8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc46a1Q6PEM8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Slc46a1Q6PEM8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc46a1Q6PEM8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.53■□□□□ 0.88
Slc46a1Q6PEM8 Mir6538-201ENSMUST00000183713 110 ntBASIC20.53■□□□□ 0.88
Slc46a1Q6PEM8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc46a1Q6PEM8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc46a1Q6PEM8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc46a1Q6PEM8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc46a1Q6PEM8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.51■□□□□ 0.87
Slc46a1Q6PEM8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc46a1Q6PEM8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc46a1Q6PEM8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.5■□□□□ 0.87
Slc46a1Q6PEM8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.5■□□□□ 0.87
Slc46a1Q6PEM8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc46a1Q6PEM8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc46a1Q6PEM8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc46a1Q6PEM8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc46a1Q6PEM8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.47■□□□□ 0.87
Slc46a1Q6PEM8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Slc46a1Q6PEM8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Slc46a1Q6PEM8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.47■□□□□ 0.87
Slc46a1Q6PEM8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc46a1Q6PEM8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Slc46a1Q6PEM8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc46a1Q6PEM8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc46a1Q6PEM8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc46a1Q6PEM8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Slc46a1Q6PEM8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Slc46a1Q6PEM8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc46a1Q6PEM8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc46a1Q6PEM8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Slc46a1Q6PEM8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc46a1Q6PEM8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc46a1Q6PEM8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc46a1Q6PEM8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc46a1Q6PEM8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.41■□□□□ 0.86
Slc46a1Q6PEM8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Slc46a1Q6PEM8 Gm4799-201ENSMUST00000095396 657 ntBASIC20.41■□□□□ 0.86
Slc46a1Q6PEM8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Slc46a1Q6PEM8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc46a1Q6PEM8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Slc46a1Q6PEM8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc46a1Q6PEM8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms