Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.88■□□□□ 0.45
Notch3Q61982 Gm5786-201ENSMUST00000085368 882 ntBASIC17.88■□□□□ 0.45
Notch3Q61982 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.88■□□□□ 0.45
Notch3Q61982 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Notch3Q61982 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Notch3Q61982 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Notch3Q61982 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Notch3Q61982 Particl-201ENSMUST00000205370 1560 ntBASIC17.87■□□□□ 0.45
Notch3Q61982 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Notch3Q61982 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Notch3Q61982 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.86■□□□□ 0.45
Notch3Q61982 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Notch3Q61982 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Notch3Q61982 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Notch3Q61982 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Notch3Q61982 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.86■□□□□ 0.45
Notch3Q61982 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Notch3Q61982 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Notch3Q61982 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Notch3Q61982 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Notch3Q61982 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Notch3Q61982 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Notch3Q61982 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.84■□□□□ 0.45
Notch3Q61982 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Notch3Q61982 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Notch3Q61982 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Notch3Q61982 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Notch3Q61982 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Notch3Q61982 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Notch3Q61982 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Notch3Q61982 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Notch3Q61982 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Notch3Q61982 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Notch3Q61982 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Notch3Q61982 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Notch3Q61982 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.81■□□□□ 0.44
Notch3Q61982 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Notch3Q61982 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.8■□□□□ 0.44
Notch3Q61982 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Notch3Q61982 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.8■□□□□ 0.44
Notch3Q61982 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Notch3Q61982 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Notch3Q61982 Gm15039-201ENSMUST00000118914 875 ntBASIC17.79■□□□□ 0.44
Notch3Q61982 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Notch3Q61982 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Notch3Q61982 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Notch3Q61982 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Notch3Q61982 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Notch3Q61982 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.78■□□□□ 0.44
Notch3Q61982 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Notch3Q61982 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Notch3Q61982 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Notch3Q61982 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Notch3Q61982 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Notch3Q61982 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Notch3Q61982 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Notch3Q61982 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Notch3Q61982 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Notch3Q61982 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Notch3Q61982 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Notch3Q61982 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Notch3Q61982 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Notch3Q61982 Zxda-201ENSMUST00000117281 2621 ntBASIC17.76■□□□□ 0.43
Notch3Q61982 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.76■□□□□ 0.43
Notch3Q61982 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Notch3Q61982 Scarna2-201ENSMUST00000157560 414 ntBASIC17.76■□□□□ 0.43
Notch3Q61982 Amer2-203ENSMUST00000225247 2662 ntBASIC17.76■□□□□ 0.43
Notch3Q61982 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Notch3Q61982 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Notch3Q61982 Gm16437-201ENSMUST00000025669 507 ntBASIC17.75■□□□□ 0.43
Notch3Q61982 Gm4799-201ENSMUST00000095396 657 ntBASIC17.75■□□□□ 0.43
Notch3Q61982 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Notch3Q61982 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Notch3Q61982 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Notch3Q61982 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Notch3Q61982 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Notch3Q61982 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Notch3Q61982 Gm45364-201ENSMUST00000210883 159 ntBASIC17.73■□□□□ 0.43
Notch3Q61982 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Notch3Q61982 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Notch3Q61982 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.73■□□□□ 0.43
Notch3Q61982 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Notch3Q61982 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Notch3Q61982 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.72■□□□□ 0.43
Notch3Q61982 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Notch3Q61982 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.72■□□□□ 0.43
Notch3Q61982 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Notch3Q61982 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Notch3Q61982 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Notch3Q61982 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.71■□□□□ 0.43
Notch3Q61982 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Notch3Q61982 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Notch3Q61982 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Notch3Q61982 Gm9806-201ENSMUST00000051080 552 ntBASIC17.7■□□□□ 0.42
Notch3Q61982 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.7■□□□□ 0.42
Notch3Q61982 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Notch3Q61982 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Notch3Q61982 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Notch3Q61982 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Notch3Q61982 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms