Protein–RNA interactions for Protein: Q61657

Hes3, Transcription factor HES-3, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes3Q61657 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hes3Q61657 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hes3Q61657 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hes3Q61657 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.2■□□□□ 0.82
Hes3Q61657 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.2■□□□□ 0.82
Hes3Q61657 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hes3Q61657 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Hes3Q61657 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Hes3Q61657 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hes3Q61657 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hes3Q61657 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Hes3Q61657 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hes3Q61657 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hes3Q61657 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hes3Q61657 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hes3Q61657 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hes3Q61657 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hes3Q61657 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.15■□□□□ 0.82
Hes3Q61657 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Hes3Q61657 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Hes3Q61657 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hes3Q61657 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hes3Q61657 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hes3Q61657 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Hes3Q61657 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hes3Q61657 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hes3Q61657 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hes3Q61657 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Hes3Q61657 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hes3Q61657 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hes3Q61657 Gm30023-201ENSMUST00000197970 889 ntBASIC20.11■□□□□ 0.81
Hes3Q61657 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hes3Q61657 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hes3Q61657 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hes3Q61657 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hes3Q61657 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hes3Q61657 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hes3Q61657 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hes3Q61657 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hes3Q61657 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hes3Q61657 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hes3Q61657 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hes3Q61657 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hes3Q61657 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hes3Q61657 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hes3Q61657 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Hes3Q61657 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hes3Q61657 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hes3Q61657 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hes3Q61657 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hes3Q61657 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hes3Q61657 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hes3Q61657 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.04■□□□□ 0.8
Hes3Q61657 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.04■□□□□ 0.8
Hes3Q61657 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hes3Q61657 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hes3Q61657 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hes3Q61657 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.03■□□□□ 0.8
Hes3Q61657 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hes3Q61657 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hes3Q61657 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.01■□□□□ 0.79
Hes3Q61657 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hes3Q61657 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hes3Q61657 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hes3Q61657 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hes3Q61657 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hes3Q61657 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hes3Q61657 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hes3Q61657 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hes3Q61657 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hes3Q61657 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Hes3Q61657 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Hes3Q61657 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hes3Q61657 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hes3Q61657 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Hes3Q61657 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.98■□□□□ 0.79
Hes3Q61657 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hes3Q61657 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.98■□□□□ 0.79
Hes3Q61657 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.98■□□□□ 0.79
Hes3Q61657 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hes3Q61657 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hes3Q61657 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hes3Q61657 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hes3Q61657 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.97■□□□□ 0.79
Hes3Q61657 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hes3Q61657 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hes3Q61657 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hes3Q61657 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Hes3Q61657 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hes3Q61657 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hes3Q61657 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hes3Q61657 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Hes3Q61657 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Hes3Q61657 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Hes3Q61657 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Hes3Q61657 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hes3Q61657 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hes3Q61657 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hes3Q61657 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hes3Q61657 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms