Protein–RNA interactions for Protein: Q61476

Cd55b, Complement decay-accelerating factor transmembrane isoform, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd55bQ61476 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cd55bQ61476 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cd55bQ61476 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cd55bQ61476 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cd55bQ61476 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd55bQ61476 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cd55bQ61476 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cd55bQ61476 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd55bQ61476 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd55bQ61476 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cd55bQ61476 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cd55bQ61476 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cd55bQ61476 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd55bQ61476 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd55bQ61476 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cd55bQ61476 Gm7432-201ENSMUST00000210343 879 ntBASIC20.63■□□□□ 0.89
Cd55bQ61476 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd55bQ61476 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd55bQ61476 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cd55bQ61476 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd55bQ61476 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd55bQ61476 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.61■□□□□ 0.89
Cd55bQ61476 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.61■□□□□ 0.89
Cd55bQ61476 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Cd55bQ61476 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd55bQ61476 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Cd55bQ61476 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd55bQ61476 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.6■□□□□ 0.89
Cd55bQ61476 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.59■□□□□ 0.89
Cd55bQ61476 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cd55bQ61476 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd55bQ61476 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cd55bQ61476 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cd55bQ61476 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
Cd55bQ61476 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.58■□□□□ 0.89
Cd55bQ61476 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cd55bQ61476 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
Cd55bQ61476 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd55bQ61476 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd55bQ61476 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd55bQ61476 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd55bQ61476 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
Cd55bQ61476 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd55bQ61476 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Cd55bQ61476 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cd55bQ61476 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd55bQ61476 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.54■□□□□ 0.88
Cd55bQ61476 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd55bQ61476 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.53■□□□□ 0.88
Cd55bQ61476 Particl-201ENSMUST00000205370 1560 ntBASIC20.53■□□□□ 0.88
Cd55bQ61476 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.53■□□□□ 0.88
Cd55bQ61476 Gm11599-201ENSMUST00000118720 878 ntBASIC20.52■□□□□ 0.88
Cd55bQ61476 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.52■□□□□ 0.88
Cd55bQ61476 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cd55bQ61476 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cd55bQ61476 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cd55bQ61476 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cd55bQ61476 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.51■□□□□ 0.87
Cd55bQ61476 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cd55bQ61476 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.5■□□□□ 0.87
Cd55bQ61476 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd55bQ61476 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd55bQ61476 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd55bQ61476 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.48■□□□□ 0.87
Cd55bQ61476 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cd55bQ61476 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cd55bQ61476 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd55bQ61476 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cd55bQ61476 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Cd55bQ61476 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd55bQ61476 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cd55bQ61476 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.46■□□□□ 0.87
Cd55bQ61476 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Cd55bQ61476 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd55bQ61476 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cd55bQ61476 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cd55bQ61476 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd55bQ61476 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd55bQ61476 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cd55bQ61476 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd55bQ61476 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd55bQ61476 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd55bQ61476 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cd55bQ61476 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd55bQ61476 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd55bQ61476 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Cd55bQ61476 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.39■□□□□ 0.86
Cd55bQ61476 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.39■□□□□ 0.85
Cd55bQ61476 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.38■□□□□ 0.85
Cd55bQ61476 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cd55bQ61476 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cd55bQ61476 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd55bQ61476 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cd55bQ61476 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd55bQ61476 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cd55bQ61476 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd55bQ61476 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cd55bQ61476 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd55bQ61476 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd55bQ61476 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms