Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Shroom1Q5SX79 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Shroom1Q5SX79 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Shroom1Q5SX79 Gm11175-201ENSMUST00000116172 543 ntBASIC25.18■■□□□ 1.62
Shroom1Q5SX79 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Shroom1Q5SX79 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Shroom1Q5SX79 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Shroom1Q5SX79 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Shroom1Q5SX79 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Shroom1Q5SX79 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
Shroom1Q5SX79 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.15■■□□□ 1.62
Shroom1Q5SX79 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Shroom1Q5SX79 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Shroom1Q5SX79 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Shroom1Q5SX79 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Shroom1Q5SX79 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.14■■□□□ 1.61
Shroom1Q5SX79 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Shroom1Q5SX79 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Shroom1Q5SX79 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Shroom1Q5SX79 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Shroom1Q5SX79 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
Shroom1Q5SX79 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Shroom1Q5SX79 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Shroom1Q5SX79 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Shroom1Q5SX79 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
Shroom1Q5SX79 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Shroom1Q5SX79 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Shroom1Q5SX79 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Shroom1Q5SX79 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.08■■□□□ 1.61
Shroom1Q5SX79 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Shroom1Q5SX79 Gm6311-201ENSMUST00000073790 878 ntBASIC25.07■■□□□ 1.6
Shroom1Q5SX79 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Shroom1Q5SX79 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
Shroom1Q5SX79 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
Shroom1Q5SX79 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Shroom1Q5SX79 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Shroom1Q5SX79 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Shroom1Q5SX79 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.03■■□□□ 1.6
Shroom1Q5SX79 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Shroom1Q5SX79 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Shroom1Q5SX79 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.02■■□□□ 1.6
Shroom1Q5SX79 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Shroom1Q5SX79 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Shroom1Q5SX79 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Shroom1Q5SX79 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom1Q5SX79 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom1Q5SX79 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom1Q5SX79 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shroom1Q5SX79 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25■■□□□ 1.59
Shroom1Q5SX79 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Shroom1Q5SX79 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25■■□□□ 1.59
Shroom1Q5SX79 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25■■□□□ 1.59
Shroom1Q5SX79 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
Shroom1Q5SX79 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Shroom1Q5SX79 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Shroom1Q5SX79 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.98■■□□□ 1.59
Shroom1Q5SX79 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Shroom1Q5SX79 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
Shroom1Q5SX79 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Shroom1Q5SX79 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Shroom1Q5SX79 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Shroom1Q5SX79 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Shroom1Q5SX79 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Shroom1Q5SX79 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.93■■□□□ 1.58
Shroom1Q5SX79 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Shroom1Q5SX79 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Shroom1Q5SX79 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Shroom1Q5SX79 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Shroom1Q5SX79 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Shroom1Q5SX79 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Shroom1Q5SX79 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Shroom1Q5SX79 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Shroom1Q5SX79 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Shroom1Q5SX79 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Shroom1Q5SX79 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Shroom1Q5SX79 Cap2-205ENSMUST00000225824 1634 ntBASIC24.89■■□□□ 1.57
Shroom1Q5SX79 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Shroom1Q5SX79 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Shroom1Q5SX79 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Shroom1Q5SX79 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Shroom1Q5SX79 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Shroom1Q5SX79 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Shroom1Q5SX79 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Shroom1Q5SX79 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Shroom1Q5SX79 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Shroom1Q5SX79 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Shroom1Q5SX79 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Shroom1Q5SX79 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Shroom1Q5SX79 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.85■■□□□ 1.57
Shroom1Q5SX79 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Shroom1Q5SX79 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Shroom1Q5SX79 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.84■■□□□ 1.57
Shroom1Q5SX79 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Shroom1Q5SX79 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.84■■□□□ 1.57
Shroom1Q5SX79 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Shroom1Q5SX79 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Shroom1Q5SX79 Gm37136-201ENSMUST00000194368 194 ntBASIC24.83■■□□□ 1.57
Shroom1Q5SX79 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Shroom1Q5SX79 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Shroom1Q5SX79 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.82■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms