Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav7-2Q5R1I3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav7-2Q5R1I3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trav7-2Q5R1I3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav7-2Q5R1I3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav7-2Q5R1I3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav7-2Q5R1I3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trav7-2Q5R1I3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-2Q5R1I3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7-2Q5R1I3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7-2Q5R1I3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7-2Q5R1I3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7-2Q5R1I3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7-2Q5R1I3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav7-2Q5R1I3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav7-2Q5R1I3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav7-2Q5R1I3 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.26■□□□□ 0.35
Trav7-2Q5R1I3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7-2Q5R1I3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7-2Q5R1I3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav7-2Q5R1I3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trav7-2Q5R1I3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.24■□□□□ 0.35
Trav7-2Q5R1I3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Trav7-2Q5R1I3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7-2Q5R1I3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Trav7-2Q5R1I3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.24■□□□□ 0.35
Trav7-2Q5R1I3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-2Q5R1I3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-2Q5R1I3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-2Q5R1I3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-2Q5R1I3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7-2Q5R1I3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Trav7-2Q5R1I3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trav7-2Q5R1I3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7-2Q5R1I3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7-2Q5R1I3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav7-2Q5R1I3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7-2Q5R1I3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-2Q5R1I3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-2Q5R1I3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-2Q5R1I3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-2Q5R1I3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-2Q5R1I3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7-2Q5R1I3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7-2Q5R1I3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7-2Q5R1I3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7-2Q5R1I3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Trav7-2Q5R1I3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7-2Q5R1I3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
Trav7-2Q5R1I3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7-2Q5R1I3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7-2Q5R1I3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7-2Q5R1I3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7-2Q5R1I3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Trav7-2Q5R1I3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7-2Q5R1I3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Trav7-2Q5R1I3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav7-2Q5R1I3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.17■□□□□ 0.34
Trav7-2Q5R1I3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav7-2Q5R1I3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7-2Q5R1I3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.16■□□□□ 0.34
Trav7-2Q5R1I3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7-2Q5R1I3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav7-2Q5R1I3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-2Q5R1I3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-2Q5R1I3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-2Q5R1I3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-2Q5R1I3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-2Q5R1I3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-2Q5R1I3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7-2Q5R1I3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.14■□□□□ 0.33
Trav7-2Q5R1I3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7-2Q5R1I3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav7-2Q5R1I3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7-2Q5R1I3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7-2Q5R1I3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Trav7-2Q5R1I3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7-2Q5R1I3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7-2Q5R1I3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7-2Q5R1I3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7-2Q5R1I3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7-2Q5R1I3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7-2Q5R1I3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7-2Q5R1I3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7-2Q5R1I3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav7-2Q5R1I3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7-2Q5R1I3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7-2Q5R1I3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7-2Q5R1I3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7-2Q5R1I3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7-2Q5R1I3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Trav7-2Q5R1I3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7-2Q5R1I3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trav7-2Q5R1I3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.09■□□□□ 0.33
Trav7-2Q5R1I3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7-2Q5R1I3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav7-2Q5R1I3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7-2Q5R1I3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav7-2Q5R1I3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7-2Q5R1I3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms