Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Vps13aQ5H8C4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Vps13aQ5H8C4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.31■■□□□ 1.48
Vps13aQ5H8C4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Vps13aQ5H8C4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Vps13aQ5H8C4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Vps13aQ5H8C4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Vps13aQ5H8C4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.28■■□□□ 1.48
Vps13aQ5H8C4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Vps13aQ5H8C4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Vps13aQ5H8C4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Vps13aQ5H8C4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Vps13aQ5H8C4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
Vps13aQ5H8C4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Vps13aQ5H8C4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.26■■□□□ 1.47
Vps13aQ5H8C4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Vps13aQ5H8C4 Gm15546-201ENSMUST00000122095 826 ntBASIC24.26■■□□□ 1.47
Vps13aQ5H8C4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Vps13aQ5H8C4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Vps13aQ5H8C4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Vps13aQ5H8C4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.23■■□□□ 1.47
Vps13aQ5H8C4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Vps13aQ5H8C4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Vps13aQ5H8C4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Vps13aQ5H8C4 Gm5921-201ENSMUST00000075898 882 ntBASIC24.23■■□□□ 1.47
Vps13aQ5H8C4 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.22■■□□□ 1.47
Vps13aQ5H8C4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Vps13aQ5H8C4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Vps13aQ5H8C4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Vps13aQ5H8C4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.21■■□□□ 1.47
Vps13aQ5H8C4 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.21■■□□□ 1.47
Vps13aQ5H8C4 Gm30023-201ENSMUST00000197970 889 ntBASIC24.2■■□□□ 1.47
Vps13aQ5H8C4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Vps13aQ5H8C4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Vps13aQ5H8C4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.19■■□□□ 1.46
Vps13aQ5H8C4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Vps13aQ5H8C4 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.18■■□□□ 1.46
Vps13aQ5H8C4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Vps13aQ5H8C4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Vps13aQ5H8C4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Vps13aQ5H8C4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Vps13aQ5H8C4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Vps13aQ5H8C4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Vps13aQ5H8C4 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.15■■□□□ 1.46
Vps13aQ5H8C4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.14■■□□□ 1.46
Vps13aQ5H8C4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Vps13aQ5H8C4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
Vps13aQ5H8C4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC24.14■■□□□ 1.45
Vps13aQ5H8C4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Vps13aQ5H8C4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Vps13aQ5H8C4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Vps13aQ5H8C4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Vps13aQ5H8C4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Vps13aQ5H8C4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Vps13aQ5H8C4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Vps13aQ5H8C4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24.12■■□□□ 1.45
Vps13aQ5H8C4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Vps13aQ5H8C4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.11■■□□□ 1.45
Vps13aQ5H8C4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Vps13aQ5H8C4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Vps13aQ5H8C4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Vps13aQ5H8C4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Vps13aQ5H8C4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Vps13aQ5H8C4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Vps13aQ5H8C4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Vps13aQ5H8C4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.1■■□□□ 1.45
Vps13aQ5H8C4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Vps13aQ5H8C4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Vps13aQ5H8C4 Gm10420-201ENSMUST00000121713 882 ntBASIC24.09■■□□□ 1.45
Vps13aQ5H8C4 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.09■■□□□ 1.45
Vps13aQ5H8C4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Vps13aQ5H8C4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Vps13aQ5H8C4 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.09■■□□□ 1.45
Vps13aQ5H8C4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Vps13aQ5H8C4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Vps13aQ5H8C4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Vps13aQ5H8C4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC24.06■■□□□ 1.44
Vps13aQ5H8C4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Vps13aQ5H8C4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.06■■□□□ 1.44
Vps13aQ5H8C4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Vps13aQ5H8C4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Vps13aQ5H8C4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Vps13aQ5H8C4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Vps13aQ5H8C4 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.05■■□□□ 1.44
Vps13aQ5H8C4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Vps13aQ5H8C4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
Vps13aQ5H8C4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.04■■□□□ 1.44
Vps13aQ5H8C4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.04■■□□□ 1.44
Vps13aQ5H8C4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Vps13aQ5H8C4 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.04■■□□□ 1.44
Vps13aQ5H8C4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Vps13aQ5H8C4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Vps13aQ5H8C4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
Vps13aQ5H8C4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Vps13aQ5H8C4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Vps13aQ5H8C4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Vps13aQ5H8C4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.01■■□□□ 1.43
Vps13aQ5H8C4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.01■■□□□ 1.43
Vps13aQ5H8C4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Vps13aQ5H8C4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 108.6 ms