Protein–RNA interactions for Protein: Q505G4

Rtl6, Retrotransposon Gag-like protein 6, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl6Q505G4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtl6Q505G4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rtl6Q505G4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rtl6Q505G4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rtl6Q505G4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
Rtl6Q505G4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rtl6Q505G4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtl6Q505G4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rtl6Q505G4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtl6Q505G4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.99■□□□□ 0.79
Rtl6Q505G4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rtl6Q505G4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtl6Q505G4 Gm7432-201ENSMUST00000210343 879 ntBASIC19.98■□□□□ 0.79
Rtl6Q505G4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtl6Q505G4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.98■□□□□ 0.79
Rtl6Q505G4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rtl6Q505G4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rtl6Q505G4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtl6Q505G4 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.97■□□□□ 0.79
Rtl6Q505G4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtl6Q505G4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtl6Q505G4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtl6Q505G4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtl6Q505G4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtl6Q505G4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.94■□□□□ 0.78
Rtl6Q505G4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
Rtl6Q505G4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rtl6Q505G4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.93■□□□□ 0.78
Rtl6Q505G4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtl6Q505G4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Rtl6Q505G4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rtl6Q505G4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rtl6Q505G4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rtl6Q505G4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rtl6Q505G4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rtl6Q505G4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtl6Q505G4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtl6Q505G4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rtl6Q505G4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rtl6Q505G4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.91■□□□□ 0.78
Rtl6Q505G4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rtl6Q505G4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Rtl6Q505G4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rtl6Q505G4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.89■□□□□ 0.77
Rtl6Q505G4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Rtl6Q505G4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rtl6Q505G4 Gm11599-201ENSMUST00000118720 878 ntBASIC19.88■□□□□ 0.77
Rtl6Q505G4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtl6Q505G4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rtl6Q505G4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Rtl6Q505G4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rtl6Q505G4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.87■□□□□ 0.77
Rtl6Q505G4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rtl6Q505G4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Rtl6Q505G4 Particl-201ENSMUST00000205370 1560 ntBASIC19.86■□□□□ 0.77
Rtl6Q505G4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtl6Q505G4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rtl6Q505G4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.84■□□□□ 0.77
Rtl6Q505G4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rtl6Q505G4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rtl6Q505G4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtl6Q505G4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.82■□□□□ 0.76
Rtl6Q505G4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rtl6Q505G4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.82■□□□□ 0.76
Rtl6Q505G4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rtl6Q505G4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rtl6Q505G4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtl6Q505G4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtl6Q505G4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtl6Q505G4 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.8■□□□□ 0.76
Rtl6Q505G4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rtl6Q505G4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rtl6Q505G4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtl6Q505G4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtl6Q505G4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtl6Q505G4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rtl6Q505G4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtl6Q505G4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtl6Q505G4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtl6Q505G4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rtl6Q505G4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtl6Q505G4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtl6Q505G4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.76■□□□□ 0.75
Rtl6Q505G4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtl6Q505G4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rtl6Q505G4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtl6Q505G4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rtl6Q505G4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.75■□□□□ 0.75
Rtl6Q505G4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtl6Q505G4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtl6Q505G4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rtl6Q505G4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rtl6Q505G4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rtl6Q505G4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtl6Q505G4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtl6Q505G4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtl6Q505G4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtl6Q505G4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtl6Q505G4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rtl6Q505G4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms