Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Lsmem1Q3UQS2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Lsmem1Q3UQS2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Lsmem1Q3UQS2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Lsmem1Q3UQS2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Lsmem1Q3UQS2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Lsmem1Q3UQS2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Lsmem1Q3UQS2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Lsmem1Q3UQS2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Lsmem1Q3UQS2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Lsmem1Q3UQS2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Lsmem1Q3UQS2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Lsmem1Q3UQS2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.11■■□□□ 1.45
Lsmem1Q3UQS2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Lsmem1Q3UQS2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Lsmem1Q3UQS2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Lsmem1Q3UQS2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Lsmem1Q3UQS2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Lsmem1Q3UQS2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Lsmem1Q3UQS2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Lsmem1Q3UQS2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Lsmem1Q3UQS2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Lsmem1Q3UQS2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Lsmem1Q3UQS2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Lsmem1Q3UQS2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Lsmem1Q3UQS2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Lsmem1Q3UQS2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Lsmem1Q3UQS2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Lsmem1Q3UQS2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Lsmem1Q3UQS2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Lsmem1Q3UQS2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.03■■□□□ 1.44
Lsmem1Q3UQS2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Lsmem1Q3UQS2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Lsmem1Q3UQS2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Lsmem1Q3UQS2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Lsmem1Q3UQS2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.02■■□□□ 1.43
Lsmem1Q3UQS2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Lsmem1Q3UQS2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Lsmem1Q3UQS2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Lsmem1Q3UQS2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24■■□□□ 1.43
Lsmem1Q3UQS2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Lsmem1Q3UQS2 Particl-201ENSMUST00000205370 1560 ntBASIC23.99■■□□□ 1.43
Lsmem1Q3UQS2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Lsmem1Q3UQS2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Lsmem1Q3UQS2 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.99■■□□□ 1.43
Lsmem1Q3UQS2 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.99■■□□□ 1.43
Lsmem1Q3UQS2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Lsmem1Q3UQS2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Lsmem1Q3UQS2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Lsmem1Q3UQS2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Lsmem1Q3UQS2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Lsmem1Q3UQS2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Lsmem1Q3UQS2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.97■■□□□ 1.43
Lsmem1Q3UQS2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.96■■□□□ 1.43
Lsmem1Q3UQS2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Lsmem1Q3UQS2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Lsmem1Q3UQS2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.95■■□□□ 1.42
Lsmem1Q3UQS2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.95■■□□□ 1.42
Lsmem1Q3UQS2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Lsmem1Q3UQS2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Lsmem1Q3UQS2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Lsmem1Q3UQS2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Lsmem1Q3UQS2 Gm7432-201ENSMUST00000210343 879 ntBASIC23.92■■□□□ 1.42
Lsmem1Q3UQS2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.91■■□□□ 1.42
Lsmem1Q3UQS2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Lsmem1Q3UQS2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Lsmem1Q3UQS2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Lsmem1Q3UQS2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.91■■□□□ 1.42
Lsmem1Q3UQS2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Lsmem1Q3UQS2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Lsmem1Q3UQS2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Lsmem1Q3UQS2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Lsmem1Q3UQS2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.9■■□□□ 1.42
Lsmem1Q3UQS2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Lsmem1Q3UQS2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Lsmem1Q3UQS2 Gm37136-201ENSMUST00000194368 194 ntBASIC23.89■■□□□ 1.41
Lsmem1Q3UQS2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Lsmem1Q3UQS2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Lsmem1Q3UQS2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.87■■□□□ 1.41
Lsmem1Q3UQS2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Lsmem1Q3UQS2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Lsmem1Q3UQS2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Lsmem1Q3UQS2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.86■■□□□ 1.41
Lsmem1Q3UQS2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Lsmem1Q3UQS2 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.85■■□□□ 1.41
Lsmem1Q3UQS2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Lsmem1Q3UQS2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Lsmem1Q3UQS2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.84■■□□□ 1.41
Lsmem1Q3UQS2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Lsmem1Q3UQS2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Lsmem1Q3UQS2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Lsmem1Q3UQS2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Lsmem1Q3UQS2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.82■■□□□ 1.4
Lsmem1Q3UQS2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Lsmem1Q3UQS2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Lsmem1Q3UQS2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.81■■□□□ 1.4
Lsmem1Q3UQS2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
Lsmem1Q3UQS2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Lsmem1Q3UQS2 Gm11599-201ENSMUST00000118720 878 ntBASIC23.79■■□□□ 1.4
Lsmem1Q3UQS2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms