Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Uspl1Q3ULM6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Uspl1Q3ULM6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31.01■■■□□ 2.55
Uspl1Q3ULM6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Uspl1Q3ULM6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Uspl1Q3ULM6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Uspl1Q3ULM6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Uspl1Q3ULM6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Uspl1Q3ULM6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Uspl1Q3ULM6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Uspl1Q3ULM6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Uspl1Q3ULM6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC30.94■■■□□ 2.54
Uspl1Q3ULM6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Uspl1Q3ULM6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Uspl1Q3ULM6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Uspl1Q3ULM6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Uspl1Q3ULM6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Uspl1Q3ULM6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Uspl1Q3ULM6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Uspl1Q3ULM6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Uspl1Q3ULM6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Uspl1Q3ULM6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC30.89■■■□□ 2.54
Uspl1Q3ULM6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Uspl1Q3ULM6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Uspl1Q3ULM6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Uspl1Q3ULM6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Uspl1Q3ULM6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Uspl1Q3ULM6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Uspl1Q3ULM6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Uspl1Q3ULM6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Uspl1Q3ULM6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Uspl1Q3ULM6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC30.84■■■□□ 2.53
Uspl1Q3ULM6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Uspl1Q3ULM6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Uspl1Q3ULM6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC30.82■■■□□ 2.53
Uspl1Q3ULM6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Uspl1Q3ULM6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
Uspl1Q3ULM6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
Uspl1Q3ULM6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Uspl1Q3ULM6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Uspl1Q3ULM6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Uspl1Q3ULM6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
Uspl1Q3ULM6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
Uspl1Q3ULM6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Uspl1Q3ULM6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Uspl1Q3ULM6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
Uspl1Q3ULM6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
Uspl1Q3ULM6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.52
Uspl1Q3ULM6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Uspl1Q3ULM6 Gm37847-201ENSMUST00000192163 1497 ntBASIC30.76■■■□□ 2.51
Uspl1Q3ULM6 Gm31748-201ENSMUST00000194938 1497 ntBASIC30.76■■■□□ 2.51
Uspl1Q3ULM6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Uspl1Q3ULM6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
Uspl1Q3ULM6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Uspl1Q3ULM6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Uspl1Q3ULM6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.72■■■□□ 2.51
Uspl1Q3ULM6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Uspl1Q3ULM6 Particl-201ENSMUST00000205370 1560 ntBASIC30.71■■■□□ 2.51
Uspl1Q3ULM6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Uspl1Q3ULM6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC30.71■■■□□ 2.51
Uspl1Q3ULM6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC30.71■■■□□ 2.51
Uspl1Q3ULM6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC30.71■■■□□ 2.51
Uspl1Q3ULM6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.69■■■□□ 2.5
Uspl1Q3ULM6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Uspl1Q3ULM6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Uspl1Q3ULM6 Gm14121-201ENSMUST00000121441 1380 ntBASIC30.67■■■□□ 2.5
Uspl1Q3ULM6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Uspl1Q3ULM6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Uspl1Q3ULM6 Gm37136-201ENSMUST00000194368 194 ntBASIC30.66■■■□□ 2.5
Uspl1Q3ULM6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
Uspl1Q3ULM6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC30.65■■■□□ 2.5
Uspl1Q3ULM6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Uspl1Q3ULM6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
Uspl1Q3ULM6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Uspl1Q3ULM6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Uspl1Q3ULM6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Uspl1Q3ULM6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Uspl1Q3ULM6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Uspl1Q3ULM6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Uspl1Q3ULM6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
Uspl1Q3ULM6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC30.62■■■□□ 2.49
Uspl1Q3ULM6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC30.62■■■□□ 2.49
Uspl1Q3ULM6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Uspl1Q3ULM6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Uspl1Q3ULM6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Uspl1Q3ULM6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Uspl1Q3ULM6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC30.6■■■□□ 2.49
Uspl1Q3ULM6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC30.6■■■□□ 2.49
Uspl1Q3ULM6 Gm7432-201ENSMUST00000210343 879 ntBASIC30.6■■■□□ 2.49
Uspl1Q3ULM6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Uspl1Q3ULM6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Uspl1Q3ULM6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Uspl1Q3ULM6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC30.58■■■□□ 2.49
Uspl1Q3ULM6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Uspl1Q3ULM6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Uspl1Q3ULM6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Uspl1Q3ULM6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Uspl1Q3ULM6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Uspl1Q3ULM6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
Uspl1Q3ULM6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms