Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.16
Tnrc6aQ3UHK8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnrc6aQ3UHK8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnrc6aQ3UHK8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.32■■□□□ 1.16
Tnrc6aQ3UHK8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Tnrc6aQ3UHK8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnrc6aQ3UHK8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnrc6aQ3UHK8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.32■■□□□ 1.16
Tnrc6aQ3UHK8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tnrc6aQ3UHK8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tnrc6aQ3UHK8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.3■■□□□ 1.16
Tnrc6aQ3UHK8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tnrc6aQ3UHK8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Tnrc6aQ3UHK8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tnrc6aQ3UHK8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tnrc6aQ3UHK8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Tnrc6aQ3UHK8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.28■■□□□ 1.16
Tnrc6aQ3UHK8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tnrc6aQ3UHK8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.27■■□□□ 1.16
Tnrc6aQ3UHK8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tnrc6aQ3UHK8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.26■■□□□ 1.15
Tnrc6aQ3UHK8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tnrc6aQ3UHK8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.24■■□□□ 1.15
Tnrc6aQ3UHK8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Tnrc6aQ3UHK8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tnrc6aQ3UHK8 Amer2-203ENSMUST00000225247 2662 ntBASIC22.23■■□□□ 1.15
Tnrc6aQ3UHK8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Tnrc6aQ3UHK8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Tnrc6aQ3UHK8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Tnrc6aQ3UHK8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tnrc6aQ3UHK8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tnrc6aQ3UHK8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tnrc6aQ3UHK8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tnrc6aQ3UHK8 Gm45364-201ENSMUST00000210883 159 ntBASIC22.22■■□□□ 1.15
Tnrc6aQ3UHK8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tnrc6aQ3UHK8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tnrc6aQ3UHK8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Tnrc6aQ3UHK8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.2■■□□□ 1.14
Tnrc6aQ3UHK8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Tnrc6aQ3UHK8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Tnrc6aQ3UHK8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tnrc6aQ3UHK8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Tnrc6aQ3UHK8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Tnrc6aQ3UHK8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
Tnrc6aQ3UHK8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tnrc6aQ3UHK8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tnrc6aQ3UHK8 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.17■■□□□ 1.14
Tnrc6aQ3UHK8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tnrc6aQ3UHK8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tnrc6aQ3UHK8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tnrc6aQ3UHK8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tnrc6aQ3UHK8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.16■■□□□ 1.14
Tnrc6aQ3UHK8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tnrc6aQ3UHK8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tnrc6aQ3UHK8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Tnrc6aQ3UHK8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Tnrc6aQ3UHK8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Tnrc6aQ3UHK8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tnrc6aQ3UHK8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tnrc6aQ3UHK8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Tnrc6aQ3UHK8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tnrc6aQ3UHK8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Tnrc6aQ3UHK8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.12■■□□□ 1.13
Tnrc6aQ3UHK8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.11■■□□□ 1.13
Tnrc6aQ3UHK8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Tnrc6aQ3UHK8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tnrc6aQ3UHK8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Tnrc6aQ3UHK8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.11■■□□□ 1.13
Tnrc6aQ3UHK8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tnrc6aQ3UHK8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.1■■□□□ 1.13
Tnrc6aQ3UHK8 Gm12366-201ENSMUST00000121722 873 ntBASIC22.1■■□□□ 1.13
Tnrc6aQ3UHK8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.1■■□□□ 1.13
Tnrc6aQ3UHK8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.1■■□□□ 1.13
Tnrc6aQ3UHK8 Gm5786-201ENSMUST00000085368 882 ntBASIC22.1■■□□□ 1.13
Tnrc6aQ3UHK8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.1■■□□□ 1.13
Tnrc6aQ3UHK8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Gm37136-201ENSMUST00000194368 194 ntBASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Gm11687-201ENSMUST00000118911 886 ntBASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Scarna2-201ENSMUST00000157560 414 ntBASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Gm9806-201ENSMUST00000051080 552 ntBASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Tnrc6aQ3UHK8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.08■■□□□ 1.13
Tnrc6aQ3UHK8 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.07■■□□□ 1.12
Tnrc6aQ3UHK8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Tnrc6aQ3UHK8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Tnrc6aQ3UHK8 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.07■■□□□ 1.12
Tnrc6aQ3UHK8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tnrc6aQ3UHK8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.07■■□□□ 1.12
Tnrc6aQ3UHK8 Gm4799-201ENSMUST00000095396 657 ntBASIC22.07■■□□□ 1.12
Tnrc6aQ3UHK8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Tnrc6aQ3UHK8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.06■■□□□ 1.12
Tnrc6aQ3UHK8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Tnrc6aQ3UHK8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Tnrc6aQ3UHK8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.04■■□□□ 1.12
Tnrc6aQ3UHK8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms