Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.16
Tnrc6aQ3UHK8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnrc6aQ3UHK8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnrc6aQ3UHK8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.32■■□□□ 1.16
Tnrc6aQ3UHK8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Tnrc6aQ3UHK8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnrc6aQ3UHK8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnrc6aQ3UHK8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.32■■□□□ 1.16
Tnrc6aQ3UHK8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tnrc6aQ3UHK8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tnrc6aQ3UHK8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.3■■□□□ 1.16
Tnrc6aQ3UHK8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tnrc6aQ3UHK8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Tnrc6aQ3UHK8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tnrc6aQ3UHK8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tnrc6aQ3UHK8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Tnrc6aQ3UHK8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.28■■□□□ 1.16
Tnrc6aQ3UHK8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tnrc6aQ3UHK8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.27■■□□□ 1.16
Tnrc6aQ3UHK8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tnrc6aQ3UHK8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.26■■□□□ 1.15
Tnrc6aQ3UHK8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tnrc6aQ3UHK8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.24■■□□□ 1.15
Tnrc6aQ3UHK8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Tnrc6aQ3UHK8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tnrc6aQ3UHK8 Amer2-203ENSMUST00000225247 2662 ntBASIC22.23■■□□□ 1.15
Tnrc6aQ3UHK8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Tnrc6aQ3UHK8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Tnrc6aQ3UHK8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Tnrc6aQ3UHK8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tnrc6aQ3UHK8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tnrc6aQ3UHK8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tnrc6aQ3UHK8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tnrc6aQ3UHK8 Gm45364-201ENSMUST00000210883 159 ntBASIC22.22■■□□□ 1.15
Tnrc6aQ3UHK8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tnrc6aQ3UHK8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tnrc6aQ3UHK8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Tnrc6aQ3UHK8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.2■■□□□ 1.14
Tnrc6aQ3UHK8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Tnrc6aQ3UHK8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Tnrc6aQ3UHK8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tnrc6aQ3UHK8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Tnrc6aQ3UHK8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Tnrc6aQ3UHK8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
Tnrc6aQ3UHK8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tnrc6aQ3UHK8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tnrc6aQ3UHK8 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.17■■□□□ 1.14
Tnrc6aQ3UHK8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tnrc6aQ3UHK8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tnrc6aQ3UHK8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tnrc6aQ3UHK8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tnrc6aQ3UHK8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.16■■□□□ 1.14
Tnrc6aQ3UHK8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tnrc6aQ3UHK8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tnrc6aQ3UHK8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Tnrc6aQ3UHK8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Tnrc6aQ3UHK8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Tnrc6aQ3UHK8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tnrc6aQ3UHK8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tnrc6aQ3UHK8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Tnrc6aQ3UHK8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tnrc6aQ3UHK8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Tnrc6aQ3UHK8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.12■■□□□ 1.13
Tnrc6aQ3UHK8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.11■■□□□ 1.13
Tnrc6aQ3UHK8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Tnrc6aQ3UHK8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tnrc6aQ3UHK8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Tnrc6aQ3UHK8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.11■■□□□ 1.13
Tnrc6aQ3UHK8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tnrc6aQ3UHK8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.1■■□□□ 1.13
Tnrc6aQ3UHK8 Gm12366-201ENSMUST00000121722 873 ntBASIC22.1■■□□□ 1.13
Tnrc6aQ3UHK8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.1■■□□□ 1.13
Tnrc6aQ3UHK8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.1■■□□□ 1.13
Tnrc6aQ3UHK8 Gm5786-201ENSMUST00000085368 882 ntBASIC22.1■■□□□ 1.13
Tnrc6aQ3UHK8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.1■■□□□ 1.13
Tnrc6aQ3UHK8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Gm37136-201ENSMUST00000194368 194 ntBASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Gm11687-201ENSMUST00000118911 886 ntBASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Scarna2-201ENSMUST00000157560 414 ntBASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Gm9806-201ENSMUST00000051080 552 ntBASIC22.09■■□□□ 1.13
Tnrc6aQ3UHK8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Tnrc6aQ3UHK8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.08■■□□□ 1.13
Tnrc6aQ3UHK8 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.07■■□□□ 1.12
Tnrc6aQ3UHK8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Tnrc6aQ3UHK8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Tnrc6aQ3UHK8 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.07■■□□□ 1.12
Tnrc6aQ3UHK8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tnrc6aQ3UHK8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.07■■□□□ 1.12
Tnrc6aQ3UHK8 Gm4799-201ENSMUST00000095396 657 ntBASIC22.07■■□□□ 1.12
Tnrc6aQ3UHK8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Tnrc6aQ3UHK8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.06■■□□□ 1.12
Tnrc6aQ3UHK8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Tnrc6aQ3UHK8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Tnrc6aQ3UHK8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.04■■□□□ 1.12
Tnrc6aQ3UHK8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms