Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Shcbp1lQ3TTP0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.7■■□□□ 1.38
Shcbp1lQ3TTP0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shcbp1lQ3TTP0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shcbp1lQ3TTP0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shcbp1lQ3TTP0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.69■■□□□ 1.38
Shcbp1lQ3TTP0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.69■■□□□ 1.38
Shcbp1lQ3TTP0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Shcbp1lQ3TTP0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Shcbp1lQ3TTP0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.66■■□□□ 1.38
Shcbp1lQ3TTP0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Shcbp1lQ3TTP0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Shcbp1lQ3TTP0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.66■■□□□ 1.38
Shcbp1lQ3TTP0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Shcbp1lQ3TTP0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Shcbp1lQ3TTP0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Shcbp1lQ3TTP0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Shcbp1lQ3TTP0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Shcbp1lQ3TTP0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Shcbp1lQ3TTP0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Shcbp1lQ3TTP0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Shcbp1lQ3TTP0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Shcbp1lQ3TTP0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Shcbp1lQ3TTP0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Shcbp1lQ3TTP0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Shcbp1lQ3TTP0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.61■■□□□ 1.37
Shcbp1lQ3TTP0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Shcbp1lQ3TTP0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.6■■□□□ 1.37
Shcbp1lQ3TTP0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Shcbp1lQ3TTP0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
Shcbp1lQ3TTP0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
Shcbp1lQ3TTP0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Shcbp1lQ3TTP0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Shcbp1lQ3TTP0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Shcbp1lQ3TTP0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.58■■□□□ 1.36
Shcbp1lQ3TTP0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Shcbp1lQ3TTP0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Shcbp1lQ3TTP0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.56■■□□□ 1.36
Shcbp1lQ3TTP0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.56■■□□□ 1.36
Shcbp1lQ3TTP0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Shcbp1lQ3TTP0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Shcbp1lQ3TTP0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shcbp1lQ3TTP0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shcbp1lQ3TTP0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shcbp1lQ3TTP0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Shcbp1lQ3TTP0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
Shcbp1lQ3TTP0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
Shcbp1lQ3TTP0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Shcbp1lQ3TTP0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Shcbp1lQ3TTP0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Shcbp1lQ3TTP0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Shcbp1lQ3TTP0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Shcbp1lQ3TTP0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Shcbp1lQ3TTP0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.35
Shcbp1lQ3TTP0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Shcbp1lQ3TTP0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.51■■□□□ 1.35
Shcbp1lQ3TTP0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Shcbp1lQ3TTP0 Gm6311-201ENSMUST00000073790 878 ntBASIC23.51■■□□□ 1.35
Shcbp1lQ3TTP0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Shcbp1lQ3TTP0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
Shcbp1lQ3TTP0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Shcbp1lQ3TTP0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Shcbp1lQ3TTP0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Shcbp1lQ3TTP0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Shcbp1lQ3TTP0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Shcbp1lQ3TTP0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.48■■□□□ 1.35
Shcbp1lQ3TTP0 Amer2-203ENSMUST00000225247 2662 ntBASIC23.48■■□□□ 1.35
Shcbp1lQ3TTP0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.47■■□□□ 1.35
Shcbp1lQ3TTP0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
Shcbp1lQ3TTP0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Shcbp1lQ3TTP0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Shcbp1lQ3TTP0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.44■■□□□ 1.34
Shcbp1lQ3TTP0 Gm37136-201ENSMUST00000194368 194 ntBASIC23.44■■□□□ 1.34
Shcbp1lQ3TTP0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Shcbp1lQ3TTP0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.43■■□□□ 1.34
Shcbp1lQ3TTP0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.43■■□□□ 1.34
Shcbp1lQ3TTP0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Shcbp1lQ3TTP0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Shcbp1lQ3TTP0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Shcbp1lQ3TTP0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Shcbp1lQ3TTP0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Shcbp1lQ3TTP0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Shcbp1lQ3TTP0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.42■■□□□ 1.34
Shcbp1lQ3TTP0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Shcbp1lQ3TTP0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Shcbp1lQ3TTP0 Mir6538-201ENSMUST00000183713 110 ntBASIC23.41■■□□□ 1.34
Shcbp1lQ3TTP0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shcbp1lQ3TTP0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shcbp1lQ3TTP0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Shcbp1lQ3TTP0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Shcbp1lQ3TTP0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Shcbp1lQ3TTP0 Gm4799-201ENSMUST00000095396 657 ntBASIC23.39■■□□□ 1.33
Shcbp1lQ3TTP0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Shcbp1lQ3TTP0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Shcbp1lQ3TTP0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Shcbp1lQ3TTP0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Shcbp1lQ3TTP0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.37■■□□□ 1.33
Shcbp1lQ3TTP0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.37■■□□□ 1.33
Shcbp1lQ3TTP0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Shcbp1lQ3TTP0 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.36■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms