Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Nhej1Q3KNJ2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Nhej1Q3KNJ2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.08■■□□□ 1.61
Nhej1Q3KNJ2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.61
Nhej1Q3KNJ2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.08■■□□□ 1.61
Nhej1Q3KNJ2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.08■■□□□ 1.61
Nhej1Q3KNJ2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Nhej1Q3KNJ2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Nhej1Q3KNJ2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
Nhej1Q3KNJ2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Nhej1Q3KNJ2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Nhej1Q3KNJ2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Nhej1Q3KNJ2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.06■■□□□ 1.6
Nhej1Q3KNJ2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Nhej1Q3KNJ2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Nhej1Q3KNJ2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Nhej1Q3KNJ2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Nhej1Q3KNJ2 Gm24970-201ENSMUST00000175582 82 ntBASIC25.04■■□□□ 1.6
Nhej1Q3KNJ2 Gm9397-201ENSMUST00000200125 605 ntBASIC25.04■■□□□ 1.6
Nhej1Q3KNJ2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.04■■□□□ 1.6
Nhej1Q3KNJ2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Nhej1Q3KNJ2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Nhej1Q3KNJ2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Nhej1Q3KNJ2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Nhej1Q3KNJ2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Nhej1Q3KNJ2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Nhej1Q3KNJ2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Nhej1Q3KNJ2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Nhej1Q3KNJ2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
Nhej1Q3KNJ2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Nhej1Q3KNJ2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Nhej1Q3KNJ2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Nhej1Q3KNJ2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.99■■□□□ 1.59
Nhej1Q3KNJ2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Nhej1Q3KNJ2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Nhej1Q3KNJ2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Nhej1Q3KNJ2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Nhej1Q3KNJ2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.98■■□□□ 1.59
Nhej1Q3KNJ2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Nhej1Q3KNJ2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Nhej1Q3KNJ2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Nhej1Q3KNJ2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Nhej1Q3KNJ2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Nhej1Q3KNJ2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Nhej1Q3KNJ2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Nhej1Q3KNJ2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Nhej1Q3KNJ2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.96■■□□□ 1.59
Nhej1Q3KNJ2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Nhej1Q3KNJ2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Nhej1Q3KNJ2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Nhej1Q3KNJ2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Nhej1Q3KNJ2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
Nhej1Q3KNJ2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Nhej1Q3KNJ2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.93■■□□□ 1.58
Nhej1Q3KNJ2 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.93■■□□□ 1.58
Nhej1Q3KNJ2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.93■■□□□ 1.58
Nhej1Q3KNJ2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Nhej1Q3KNJ2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
Nhej1Q3KNJ2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Nhej1Q3KNJ2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Nhej1Q3KNJ2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Nhej1Q3KNJ2 Gm30023-201ENSMUST00000197970 889 ntBASIC24.9■■□□□ 1.58
Nhej1Q3KNJ2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Nhej1Q3KNJ2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Nhej1Q3KNJ2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Nhej1Q3KNJ2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Nhej1Q3KNJ2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Nhej1Q3KNJ2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Nhej1Q3KNJ2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Nhej1Q3KNJ2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Nhej1Q3KNJ2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Nhej1Q3KNJ2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.88■■□□□ 1.57
Nhej1Q3KNJ2 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.88■■□□□ 1.57
Nhej1Q3KNJ2 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.88■■□□□ 1.57
Nhej1Q3KNJ2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Nhej1Q3KNJ2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Nhej1Q3KNJ2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Nhej1Q3KNJ2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Nhej1Q3KNJ2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.85■■□□□ 1.57
Nhej1Q3KNJ2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Nhej1Q3KNJ2 Particl-201ENSMUST00000205370 1560 ntBASIC24.84■■□□□ 1.57
Nhej1Q3KNJ2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Nhej1Q3KNJ2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Nhej1Q3KNJ2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Nhej1Q3KNJ2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Nhej1Q3KNJ2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Nhej1Q3KNJ2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Nhej1Q3KNJ2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Nhej1Q3KNJ2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
Nhej1Q3KNJ2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Nhej1Q3KNJ2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Nhej1Q3KNJ2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Nhej1Q3KNJ2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Nhej1Q3KNJ2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Nhej1Q3KNJ2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Nhej1Q3KNJ2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Nhej1Q3KNJ2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Nhej1Q3KNJ2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Nhej1Q3KNJ2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Nhej1Q3KNJ2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms