Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cacna1aP97445 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cacna1aP97445 Scarna2-201ENSMUST00000157560 414 ntBASIC22.12■■□□□ 1.13
Cacna1aP97445 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.11■■□□□ 1.13
Cacna1aP97445 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cacna1aP97445 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.1■■□□□ 1.13
Cacna1aP97445 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.1■■□□□ 1.13
Cacna1aP97445 Gm9806-201ENSMUST00000051080 552 ntBASIC22.1■■□□□ 1.13
Cacna1aP97445 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cacna1aP97445 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Cacna1aP97445 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cacna1aP97445 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.09■■□□□ 1.13
Cacna1aP97445 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.09■■□□□ 1.13
Cacna1aP97445 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cacna1aP97445 Gm11687-201ENSMUST00000118911 886 ntBASIC22.08■■□□□ 1.13
Cacna1aP97445 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cacna1aP97445 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Cacna1aP97445 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cacna1aP97445 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cacna1aP97445 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cacna1aP97445 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.06■■□□□ 1.12
Cacna1aP97445 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cacna1aP97445 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cacna1aP97445 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cacna1aP97445 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cacna1aP97445 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
Cacna1aP97445 Gm16437-201ENSMUST00000025669 507 ntBASIC22.05■■□□□ 1.12
Cacna1aP97445 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Cacna1aP97445 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.05■■□□□ 1.12
Cacna1aP97445 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cacna1aP97445 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cacna1aP97445 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.04■■□□□ 1.12
Cacna1aP97445 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cacna1aP97445 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cacna1aP97445 Gm7332-201ENSMUST00000118351 454 ntBASIC22.02■■□□□ 1.12
Cacna1aP97445 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.02■■□□□ 1.12
Cacna1aP97445 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cacna1aP97445 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cacna1aP97445 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cacna1aP97445 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cacna1aP97445 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.01■■□□□ 1.11
Cacna1aP97445 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Cacna1aP97445 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cacna1aP97445 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cacna1aP97445 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cacna1aP97445 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.99■■□□□ 1.11
Cacna1aP97445 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cacna1aP97445 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cacna1aP97445 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cacna1aP97445 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Cacna1aP97445 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.98■■□□□ 1.11
Cacna1aP97445 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cacna1aP97445 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.97■■□□□ 1.11
Cacna1aP97445 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Cacna1aP97445 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cacna1aP97445 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cacna1aP97445 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cacna1aP97445 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cacna1aP97445 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cacna1aP97445 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Cacna1aP97445 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cacna1aP97445 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.93■■□□□ 1.1
Cacna1aP97445 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cacna1aP97445 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.92■■□□□ 1.1
Cacna1aP97445 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cacna1aP97445 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.9■■□□□ 1.1
Cacna1aP97445 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cacna1aP97445 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.9■■□□□ 1.1
Cacna1aP97445 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.9■■□□□ 1.1
Cacna1aP97445 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cacna1aP97445 Gm27502-201ENSMUST00000183495 199 ntBASIC21.89■■□□□ 1.09
Cacna1aP97445 Mir3960-201ENSMUST00000198213 73 ntBASIC21.89■■□□□ 1.09
Cacna1aP97445 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cacna1aP97445 Gm14523-201ENSMUST00000117260 558 ntBASIC21.87■■□□□ 1.09
Cacna1aP97445 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cacna1aP97445 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cacna1aP97445 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cacna1aP97445 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Cacna1aP97445 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cacna1aP97445 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cacna1aP97445 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cacna1aP97445 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cacna1aP97445 Gm37136-201ENSMUST00000194368 194 ntBASIC21.85■■□□□ 1.09
Cacna1aP97445 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.85■■□□□ 1.09
Cacna1aP97445 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cacna1aP97445 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cacna1aP97445 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Cacna1aP97445 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cacna1aP97445 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cacna1aP97445 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.83■■□□□ 1.08
Cacna1aP97445 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.83■■□□□ 1.08
Cacna1aP97445 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.82■■□□□ 1.08
Cacna1aP97445 Gm15546-201ENSMUST00000122095 826 ntBASIC21.82■■□□□ 1.08
Cacna1aP97445 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.82■■□□□ 1.08
Cacna1aP97445 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.82■■□□□ 1.08
Cacna1aP97445 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cacna1aP97445 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Cacna1aP97445 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.81■■□□□ 1.08
Cacna1aP97445 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Cacna1aP97445 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms