Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Six5P70178 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Six5P70178 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Six5P70178 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.02■■□□□ 1.12
Six5P70178 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Six5P70178 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Six5P70178 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.02■■□□□ 1.11
Six5P70178 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Six5P70178 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22■■□□□ 1.11
Six5P70178 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22■■□□□ 1.11
Six5P70178 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Six5P70178 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.99■■□□□ 1.11
Six5P70178 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.99■■□□□ 1.11
Six5P70178 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Six5P70178 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Six5P70178 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.99■■□□□ 1.11
Six5P70178 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Six5P70178 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Six5P70178 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.96■■□□□ 1.11
Six5P70178 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Six5P70178 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.95■■□□□ 1.1
Six5P70178 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Six5P70178 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Six5P70178 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Six5P70178 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Six5P70178 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Six5P70178 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Six5P70178 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Six5P70178 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Six5P70178 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Six5P70178 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Six5P70178 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Six5P70178 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.93■■□□□ 1.1
Six5P70178 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Six5P70178 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Six5P70178 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Six5P70178 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.91■■□□□ 1.1
Six5P70178 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Six5P70178 Particl-201ENSMUST00000205370 1560 ntBASIC21.91■■□□□ 1.1
Six5P70178 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Six5P70178 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Six5P70178 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.89■■□□□ 1.09
Six5P70178 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Six5P70178 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Six5P70178 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Six5P70178 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Six5P70178 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Six5P70178 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Six5P70178 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Six5P70178 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.87■■□□□ 1.09
Six5P70178 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.87■■□□□ 1.09
Six5P70178 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Six5P70178 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Six5P70178 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Six5P70178 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Six5P70178 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Six5P70178 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Six5P70178 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Six5P70178 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Six5P70178 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Six5P70178 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Six5P70178 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Six5P70178 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Six5P70178 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Six5P70178 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Six5P70178 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Six5P70178 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Six5P70178 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Six5P70178 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Six5P70178 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Six5P70178 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.78■■□□□ 1.08
Six5P70178 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.78■■□□□ 1.08
Six5P70178 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Six5P70178 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Six5P70178 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Six5P70178 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Six5P70178 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Six5P70178 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Six5P70178 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Six5P70178 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Six5P70178 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Six5P70178 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.76■■□□□ 1.07
Six5P70178 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
Six5P70178 Gm37136-201ENSMUST00000194368 194 ntBASIC21.75■■□□□ 1.07
Six5P70178 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.75■■□□□ 1.07
Six5P70178 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Six5P70178 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Six5P70178 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Six5P70178 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Six5P70178 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Six5P70178 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Six5P70178 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.73■■□□□ 1.07
Six5P70178 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Six5P70178 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.72■■□□□ 1.07
Six5P70178 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.72■■□□□ 1.07
Six5P70178 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Six5P70178 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Six5P70178 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Six5P70178 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Six5P70178 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms