Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
Gdf6P43028 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Gdf6P43028 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Gdf6P43028 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Gdf6P43028 Amer2-203ENSMUST00000225247 2662 ntBASIC25.17■■□□□ 1.62
Gdf6P43028 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Gdf6P43028 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Gdf6P43028 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.15■■□□□ 1.62
Gdf6P43028 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Gdf6P43028 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Gdf6P43028 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Gdf6P43028 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.15■■□□□ 1.62
Gdf6P43028 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Gdf6P43028 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.14■■□□□ 1.62
Gdf6P43028 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Gdf6P43028 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Gdf6P43028 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Gdf6P43028 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Gdf6P43028 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Gdf6P43028 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Gdf6P43028 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
Gdf6P43028 Gm6311-201ENSMUST00000073790 878 ntBASIC25.09■■□□□ 1.61
Gdf6P43028 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.08■■□□□ 1.61
Gdf6P43028 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
Gdf6P43028 Gm11175-201ENSMUST00000116172 543 ntBASIC25.07■■□□□ 1.6
Gdf6P43028 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.07■■□□□ 1.6
Gdf6P43028 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Gdf6P43028 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
Gdf6P43028 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
Gdf6P43028 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Gdf6P43028 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.05■■□□□ 1.6
Gdf6P43028 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Gdf6P43028 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Gdf6P43028 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Gdf6P43028 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.03■■□□□ 1.6
Gdf6P43028 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Gdf6P43028 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Gdf6P43028 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Gdf6P43028 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Gdf6P43028 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Gdf6P43028 Gm37136-201ENSMUST00000194368 194 ntBASIC25.01■■□□□ 1.59
Gdf6P43028 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25■■□□□ 1.59
Gdf6P43028 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
Gdf6P43028 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Gdf6P43028 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25■■□□□ 1.59
Gdf6P43028 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.99■■□□□ 1.59
Gdf6P43028 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Gdf6P43028 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Gdf6P43028 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Gdf6P43028 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Gdf6P43028 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Gdf6P43028 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Gdf6P43028 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Gdf6P43028 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Gdf6P43028 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.98■■□□□ 1.59
Gdf6P43028 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Gdf6P43028 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.97■■□□□ 1.59
Gdf6P43028 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Gdf6P43028 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Gdf6P43028 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.96■■□□□ 1.59
Gdf6P43028 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.96■■□□□ 1.59
Gdf6P43028 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Gdf6P43028 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Gdf6P43028 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Gdf6P43028 Gm4799-201ENSMUST00000095396 657 ntBASIC24.95■■□□□ 1.58
Gdf6P43028 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Gdf6P43028 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Gdf6P43028 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Gdf6P43028 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
Gdf6P43028 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Gdf6P43028 Mir6538-201ENSMUST00000183713 110 ntBASIC24.91■■□□□ 1.58
Gdf6P43028 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Gdf6P43028 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Gdf6P43028 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.89■■□□□ 1.58
Gdf6P43028 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Gdf6P43028 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Gdf6P43028 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Gdf6P43028 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Gdf6P43028 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Gdf6P43028 Mir3960-201ENSMUST00000198213 73 ntBASIC24.86■■□□□ 1.57
Gdf6P43028 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Gdf6P43028 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.86■■□□□ 1.57
Gdf6P43028 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Gdf6P43028 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Gdf6P43028 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.84■■□□□ 1.57
Gdf6P43028 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Gdf6P43028 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
Gdf6P43028 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Gdf6P43028 Gm45364-201ENSMUST00000210883 159 ntBASIC24.82■■□□□ 1.56
Gdf6P43028 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Gdf6P43028 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Gdf6P43028 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.81■■□□□ 1.56
Gdf6P43028 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Gdf6P43028 Scarna2-201ENSMUST00000157560 414 ntBASIC24.8■■□□□ 1.56
Gdf6P43028 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Gdf6P43028 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.79■■□□□ 1.56
Gdf6P43028 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.78■■□□□ 1.56
Gdf6P43028 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Gdf6P43028 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.78■■□□□ 1.56
Gdf6P43028 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 130.3 ms