Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hmx3P42581 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmx3P42581 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hmx3P42581 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmx3P42581 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hmx3P42581 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.36■□□□□ 0.69
Hmx3P42581 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmx3P42581 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmx3P42581 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmx3P42581 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hmx3P42581 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmx3P42581 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmx3P42581 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hmx3P42581 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmx3P42581 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmx3P42581 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hmx3P42581 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hmx3P42581 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmx3P42581 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hmx3P42581 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Hmx3P42581 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Hmx3P42581 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmx3P42581 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Hmx3P42581 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmx3P42581 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hmx3P42581 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Hmx3P42581 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmx3P42581 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmx3P42581 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmx3P42581 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hmx3P42581 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmx3P42581 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmx3P42581 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmx3P42581 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmx3P42581 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmx3P42581 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Hmx3P42581 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmx3P42581 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmx3P42581 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmx3P42581 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hmx3P42581 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.3■□□□□ 0.68
Hmx3P42581 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.3■□□□□ 0.68
Hmx3P42581 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmx3P42581 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmx3P42581 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmx3P42581 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmx3P42581 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Hmx3P42581 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Hmx3P42581 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmx3P42581 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmx3P42581 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmx3P42581 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hmx3P42581 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmx3P42581 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hmx3P42581 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmx3P42581 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.28■□□□□ 0.68
Hmx3P42581 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hmx3P42581 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Hmx3P42581 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hmx3P42581 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hmx3P42581 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Hmx3P42581 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hmx3P42581 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hmx3P42581 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.27■□□□□ 0.68
Hmx3P42581 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hmx3P42581 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hmx3P42581 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmx3P42581 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmx3P42581 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hmx3P42581 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmx3P42581 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmx3P42581 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hmx3P42581 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hmx3P42581 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hmx3P42581 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.23■□□□□ 0.67
Hmx3P42581 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hmx3P42581 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hmx3P42581 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Hmx3P42581 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmx3P42581 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmx3P42581 Notumos-201ENSMUST00000151998 2659 ntBASIC19.21■□□□□ 0.67
Hmx3P42581 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Hmx3P42581 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmx3P42581 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmx3P42581 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.2■□□□□ 0.66
Hmx3P42581 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmx3P42581 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hmx3P42581 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.19■□□□□ 0.66
Hmx3P42581 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmx3P42581 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Hmx3P42581 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmx3P42581 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmx3P42581 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmx3P42581 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Hmx3P42581 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmx3P42581 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.18■□□□□ 0.66
Hmx3P42581 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmx3P42581 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hmx3P42581 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Hmx3P42581 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms