Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdkn1aP39689 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdkn1aP39689 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdkn1aP39689 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdkn1aP39689 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cdkn1aP39689 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cdkn1aP39689 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdkn1aP39689 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.54■□□□□ 0.72
Cdkn1aP39689 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdkn1aP39689 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Cdkn1aP39689 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdkn1aP39689 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Cdkn1aP39689 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdkn1aP39689 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Cdkn1aP39689 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdkn1aP39689 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdkn1aP39689 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdkn1aP39689 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.51■□□□□ 0.71
Cdkn1aP39689 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdkn1aP39689 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Cdkn1aP39689 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.51■□□□□ 0.71
Cdkn1aP39689 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdkn1aP39689 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cdkn1aP39689 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdkn1aP39689 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cdkn1aP39689 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.49■□□□□ 0.71
Cdkn1aP39689 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdkn1aP39689 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cdkn1aP39689 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdkn1aP39689 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdkn1aP39689 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.46■□□□□ 0.71
Cdkn1aP39689 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdkn1aP39689 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cdkn1aP39689 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdkn1aP39689 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdkn1aP39689 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdkn1aP39689 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cdkn1aP39689 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.45■□□□□ 0.7
Cdkn1aP39689 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkn1aP39689 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.44■□□□□ 0.7
Cdkn1aP39689 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkn1aP39689 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkn1aP39689 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cdkn1aP39689 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkn1aP39689 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cdkn1aP39689 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkn1aP39689 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkn1aP39689 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkn1aP39689 Gm6311-201ENSMUST00000073790 878 ntBASIC19.43■□□□□ 0.7
Cdkn1aP39689 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkn1aP39689 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkn1aP39689 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkn1aP39689 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Cdkn1aP39689 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.41■□□□□ 0.7
Cdkn1aP39689 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkn1aP39689 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkn1aP39689 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkn1aP39689 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cdkn1aP39689 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdkn1aP39689 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.39■□□□□ 0.69
Cdkn1aP39689 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkn1aP39689 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkn1aP39689 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cdkn1aP39689 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.38■□□□□ 0.69
Cdkn1aP39689 Gm37136-201ENSMUST00000194368 194 ntBASIC19.38■□□□□ 0.69
Cdkn1aP39689 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkn1aP39689 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkn1aP39689 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkn1aP39689 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.36■□□□□ 0.69
Cdkn1aP39689 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Cdkn1aP39689 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.36■□□□□ 0.69
Cdkn1aP39689 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkn1aP39689 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cdkn1aP39689 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cdkn1aP39689 Gm4799-201ENSMUST00000095396 657 ntBASIC19.35■□□□□ 0.69
Cdkn1aP39689 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.34■□□□□ 0.69
Cdkn1aP39689 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cdkn1aP39689 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Cdkn1aP39689 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdkn1aP39689 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.33■□□□□ 0.68
Cdkn1aP39689 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cdkn1aP39689 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkn1aP39689 Gm11175-201ENSMUST00000116172 543 ntBASIC19.31■□□□□ 0.68
Cdkn1aP39689 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkn1aP39689 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkn1aP39689 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkn1aP39689 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkn1aP39689 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkn1aP39689 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.29■□□□□ 0.68
Cdkn1aP39689 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkn1aP39689 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkn1aP39689 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkn1aP39689 Mir3960-201ENSMUST00000198213 73 ntBASIC19.27■□□□□ 0.68
Cdkn1aP39689 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkn1aP39689 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkn1aP39689 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
Cdkn1aP39689 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkn1aP39689 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkn1aP39689 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.25■□□□□ 0.67
Cdkn1aP39689 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms