Protein–RNA interactions for Protein: P28334

Htr1b, 5-hydroxytryptamine receptor 1B, mousemouse

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htr1bP28334 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Htr1bP28334 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Htr1bP28334 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Htr1bP28334 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Htr1bP28334 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.78■■□□□ 1.08
Htr1bP28334 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.78■■□□□ 1.08
Htr1bP28334 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Htr1bP28334 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Htr1bP28334 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.77■■□□□ 1.08
Htr1bP28334 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Htr1bP28334 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Htr1bP28334 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Htr1bP28334 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Htr1bP28334 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Htr1bP28334 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Htr1bP28334 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Htr1bP28334 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Htr1bP28334 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Htr1bP28334 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Htr1bP28334 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Htr1bP28334 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Htr1bP28334 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Htr1bP28334 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Htr1bP28334 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Htr1bP28334 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Htr1bP28334 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Htr1bP28334 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.74■■□□□ 1.07
Htr1bP28334 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Htr1bP28334 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Htr1bP28334 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Htr1bP28334 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.71■■□□□ 1.07
Htr1bP28334 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Htr1bP28334 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Htr1bP28334 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Htr1bP28334 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Htr1bP28334 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Htr1bP28334 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.7■■□□□ 1.06
Htr1bP28334 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Htr1bP28334 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Htr1bP28334 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Htr1bP28334 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Htr1bP28334 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Htr1bP28334 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Htr1bP28334 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Htr1bP28334 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Htr1bP28334 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Htr1bP28334 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Htr1bP28334 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Htr1bP28334 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Htr1bP28334 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.66■■□□□ 1.06
Htr1bP28334 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Htr1bP28334 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Htr1bP28334 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Htr1bP28334 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Htr1bP28334 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Htr1bP28334 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Htr1bP28334 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Htr1bP28334 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.65■■□□□ 1.06
Htr1bP28334 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Htr1bP28334 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Htr1bP28334 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Htr1bP28334 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.64■■□□□ 1.05
Htr1bP28334 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.64■■□□□ 1.05
Htr1bP28334 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Htr1bP28334 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Htr1bP28334 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Htr1bP28334 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Htr1bP28334 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Htr1bP28334 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Htr1bP28334 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Htr1bP28334 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Htr1bP28334 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Htr1bP28334 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.61■■□□□ 1.05
Htr1bP28334 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Htr1bP28334 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Htr1bP28334 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Htr1bP28334 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Htr1bP28334 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
Htr1bP28334 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Htr1bP28334 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Htr1bP28334 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Htr1bP28334 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.58■■□□□ 1.05
Htr1bP28334 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Htr1bP28334 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Htr1bP28334 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.57■■□□□ 1.04
Htr1bP28334 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Htr1bP28334 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.57■■□□□ 1.04
Htr1bP28334 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Htr1bP28334 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Htr1bP28334 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.56■■□□□ 1.04
Htr1bP28334 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.55■■□□□ 1.04
Htr1bP28334 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.54■■□□□ 1.04
Htr1bP28334 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Htr1bP28334 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Htr1bP28334 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.53■■□□□ 1.04
Htr1bP28334 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Htr1bP28334 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Htr1bP28334 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.52■■□□□ 1.04
Htr1bP28334 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.52■■□□□ 1.03
Htr1bP28334 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.52■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 182 ms