Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Hoxa6P09092 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxa6P09092 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa6P09092 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Hoxa6P09092 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.24■□□□□ 0.83
Hoxa6P09092 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Hoxa6P09092 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxa6P09092 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Hoxa6P09092 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.22■□□□□ 0.83
Hoxa6P09092 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.22■□□□□ 0.83
Hoxa6P09092 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hoxa6P09092 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxa6P09092 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxa6P09092 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hoxa6P09092 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxa6P09092 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxa6P09092 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.21■□□□□ 0.83
Hoxa6P09092 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxa6P09092 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxa6P09092 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.2■□□□□ 0.82
Hoxa6P09092 Mir6538-201ENSMUST00000183713 110 ntBASIC20.2■□□□□ 0.82
Hoxa6P09092 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxa6P09092 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxa6P09092 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxa6P09092 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Hoxa6P09092 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.18■□□□□ 0.82
Hoxa6P09092 Gm37136-201ENSMUST00000194368 194 ntBASIC20.18■□□□□ 0.82
Hoxa6P09092 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hoxa6P09092 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hoxa6P09092 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hoxa6P09092 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hoxa6P09092 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Hoxa6P09092 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxa6P09092 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Hoxa6P09092 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Hoxa6P09092 Gm6311-201ENSMUST00000073790 878 ntBASIC20.16■□□□□ 0.82
Hoxa6P09092 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hoxa6P09092 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.15■□□□□ 0.82
Hoxa6P09092 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxa6P09092 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Hoxa6P09092 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxa6P09092 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hoxa6P09092 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hoxa6P09092 Gm11175-201ENSMUST00000116172 543 ntBASIC20.13■□□□□ 0.81
Hoxa6P09092 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.13■□□□□ 0.81
Hoxa6P09092 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxa6P09092 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxa6P09092 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hoxa6P09092 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.12■□□□□ 0.81
Hoxa6P09092 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxa6P09092 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.11■□□□□ 0.81
Hoxa6P09092 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hoxa6P09092 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Hoxa6P09092 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxa6P09092 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxa6P09092 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Hoxa6P09092 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hoxa6P09092 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxa6P09092 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.09■□□□□ 0.81
Hoxa6P09092 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxa6P09092 Gm4799-201ENSMUST00000095396 657 ntBASIC20.09■□□□□ 0.81
Hoxa6P09092 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxa6P09092 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hoxa6P09092 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hoxa6P09092 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.08■□□□□ 0.8
Hoxa6P09092 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.07■□□□□ 0.8
Hoxa6P09092 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Hoxa6P09092 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Hoxa6P09092 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxa6P09092 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.06■□□□□ 0.8
Hoxa6P09092 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hoxa6P09092 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.06■□□□□ 0.8
Hoxa6P09092 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
Hoxa6P09092 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hoxa6P09092 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Hoxa6P09092 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.04■□□□□ 0.8
Hoxa6P09092 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxa6P09092 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hoxa6P09092 Mir3960-201ENSMUST00000198213 73 ntBASIC20.03■□□□□ 0.8
Hoxa6P09092 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxa6P09092 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxa6P09092 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.03■□□□□ 0.8
Hoxa6P09092 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Hoxa6P09092 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hoxa6P09092 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxa6P09092 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxa6P09092 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Hoxa6P09092 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hoxa6P09092 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa6P09092 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa6P09092 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hoxa6P09092 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxa6P09092 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxa6P09092 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxa6P09092 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Hoxa6P09092 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxa6P09092 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hoxa6P09092 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxa6P09092 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxa6P09092 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms