Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P04224 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P04224 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.44■□□□□ 0.86
P04224 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
P04224 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P04224 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
P04224 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
P04224 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.43■□□□□ 0.86
P04224 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
P04224 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
P04224 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
P04224 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
P04224 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P04224 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
P04224 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
P04224 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
P04224 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P04224 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
P04224 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
P04224 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
P04224 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
P04224 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P04224 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P04224 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
P04224 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
P04224 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
P04224 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
P04224 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
P04224 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
P04224 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
P04224 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P04224 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P04224 Gm24804-201ENSMUST00000174982 85 ntBASIC20.34■□□□□ 0.85
P04224 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
P04224 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
P04224 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P04224 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
P04224 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
P04224 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
P04224 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.33■□□□□ 0.84
P04224 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
P04224 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
P04224 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
P04224 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
P04224 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P04224 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.31■□□□□ 0.84
P04224 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P04224 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.3■□□□□ 0.84
P04224 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
P04224 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P04224 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P04224 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P04224 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
P04224 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
P04224 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P04224 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P04224 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
P04224 Gm16148-201ENSMUST00000119653 893 ntBASIC20.28■□□□□ 0.84
P04224 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P04224 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
P04224 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P04224 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
P04224 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.27■□□□□ 0.84
P04224 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
P04224 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
P04224 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
P04224 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
P04224 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
P04224 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
P04224 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
P04224 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P04224 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
P04224 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P04224 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P04224 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P04224 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
P04224 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.25■□□□□ 0.83
P04224 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P04224 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P04224 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04224 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
P04224 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04224 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04224 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04224 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
P04224 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04224 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
P04224 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P04224 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
P04224 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.23■□□□□ 0.83
P04224 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P04224 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P04224 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
P04224 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04224 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
P04224 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04224 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04224 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P04224 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P04224 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms