Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CfdP03953 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CfdP03953 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.73■□□□□ 0.75
CfdP03953 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.73■□□□□ 0.75
CfdP03953 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CfdP03953 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CfdP03953 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CfdP03953 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.72■□□□□ 0.75
CfdP03953 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CfdP03953 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CfdP03953 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CfdP03953 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CfdP03953 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.71■□□□□ 0.75
CfdP03953 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CfdP03953 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CfdP03953 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
CfdP03953 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CfdP03953 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CfdP03953 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CfdP03953 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CfdP03953 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CfdP03953 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CfdP03953 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CfdP03953 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CfdP03953 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CfdP03953 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CfdP03953 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CfdP03953 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CfdP03953 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CfdP03953 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CfdP03953 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CfdP03953 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CfdP03953 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.68■□□□□ 0.74
CfdP03953 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CfdP03953 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CfdP03953 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CfdP03953 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CfdP03953 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CfdP03953 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CfdP03953 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CfdP03953 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CfdP03953 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CfdP03953 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CfdP03953 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CfdP03953 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CfdP03953 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CfdP03953 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CfdP03953 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CfdP03953 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CfdP03953 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CfdP03953 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CfdP03953 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.63■□□□□ 0.73
CfdP03953 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CfdP03953 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CfdP03953 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CfdP03953 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CfdP03953 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CfdP03953 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CfdP03953 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CfdP03953 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CfdP03953 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CfdP03953 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CfdP03953 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CfdP03953 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CfdP03953 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CfdP03953 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CfdP03953 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CfdP03953 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.6■□□□□ 0.73
CfdP03953 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CfdP03953 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CfdP03953 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CfdP03953 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.59■□□□□ 0.73
CfdP03953 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CfdP03953 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CfdP03953 Gm26115-201ENSMUST00000175605 87 ntBASIC19.58■□□□□ 0.72
CfdP03953 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CfdP03953 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CfdP03953 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CfdP03953 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.57■□□□□ 0.72
CfdP03953 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CfdP03953 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CfdP03953 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CfdP03953 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CfdP03953 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CfdP03953 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CfdP03953 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CfdP03953 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CfdP03953 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CfdP03953 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.55■□□□□ 0.72
CfdP03953 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CfdP03953 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CfdP03953 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CfdP03953 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.54■□□□□ 0.72
CfdP03953 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CfdP03953 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CfdP03953 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CfdP03953 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CfdP03953 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CfdP03953 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CfdP03953 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms