Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.89■□□□□ 0.61
P01643 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
P01643 Gm6311-201ENSMUST00000073790 878 ntBASIC18.88■□□□□ 0.61
P01643 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
P01643 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
P01643 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01643 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01643 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01643 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P01643 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
P01643 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01643 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01643 Gm11175-201ENSMUST00000116172 543 ntBASIC18.83■□□□□ 0.6
P01643 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.83■□□□□ 0.6
P01643 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
P01643 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.82■□□□□ 0.6
P01643 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01643 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
P01643 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.82■□□□□ 0.6
P01643 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01643 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
P01643 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
P01643 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
P01643 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01643 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01643 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P01643 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P01643 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
P01643 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P01643 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.79■□□□□ 0.6
P01643 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P01643 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
P01643 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.78■□□□□ 0.6
P01643 Mir6538-201ENSMUST00000183713 110 ntBASIC18.78■□□□□ 0.6
P01643 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
P01643 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
P01643 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.77■□□□□ 0.6
P01643 Gm37136-201ENSMUST00000194368 194 ntBASIC18.77■□□□□ 0.6
P01643 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P01643 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
P01643 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01643 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
P01643 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01643 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
P01643 Gm4799-201ENSMUST00000095396 657 ntBASIC18.75■□□□□ 0.59
P01643 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01643 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01643 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01643 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01643 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01643 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P01643 Amer2-203ENSMUST00000225247 2662 ntBASIC18.74■□□□□ 0.59
P01643 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P01643 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01643 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
P01643 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01643 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.72■□□□□ 0.59
P01643 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
P01643 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01643 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
P01643 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01643 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.7■□□□□ 0.58
P01643 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01643 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01643 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01643 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.69■□□□□ 0.58
P01643 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.69■□□□□ 0.58
P01643 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
P01643 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01643 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01643 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
P01643 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01643 Mir3960-201ENSMUST00000198213 73 ntBASIC18.67■□□□□ 0.58
P01643 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01643 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.66■□□□□ 0.58
P01643 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01643 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01643 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01643 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P01643 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
P01643 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.65■□□□□ 0.58
P01643 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P01643 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
P01643 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
P01643 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.64■□□□□ 0.57
P01643 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01643 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
P01643 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
P01643 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.64■□□□□ 0.57
P01643 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P01643 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
P01643 Scarna2-201ENSMUST00000157560 414 ntBASIC18.63■□□□□ 0.57
P01643 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01643 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01643 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01643 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P01643 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P01643 Gm45364-201ENSMUST00000210883 159 ntBASIC18.62■□□□□ 0.57
P01643 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P01643 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 146.2 ms