Protein–RNA interactions for Protein: O70343

Ppargc1a, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppargc1aO70343 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.62■■□□□ 1.53
Ppargc1aO70343 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ppargc1aO70343 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
Ppargc1aO70343 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ppargc1aO70343 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ppargc1aO70343 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
Ppargc1aO70343 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ppargc1aO70343 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.59■■□□□ 1.53
Ppargc1aO70343 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ppargc1aO70343 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Ppargc1aO70343 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ppargc1aO70343 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Ppargc1aO70343 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
Ppargc1aO70343 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
Ppargc1aO70343 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ppargc1aO70343 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Ppargc1aO70343 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ppargc1aO70343 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ppargc1aO70343 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ppargc1aO70343 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Ppargc1aO70343 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ppargc1aO70343 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Ppargc1aO70343 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ppargc1aO70343 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ppargc1aO70343 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ppargc1aO70343 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ppargc1aO70343 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ppargc1aO70343 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ppargc1aO70343 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ppargc1aO70343 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ppargc1aO70343 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ppargc1aO70343 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ppargc1aO70343 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Ppargc1aO70343 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ppargc1aO70343 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Ppargc1aO70343 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.53■■□□□ 1.52
Ppargc1aO70343 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.53■■□□□ 1.52
Ppargc1aO70343 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ppargc1aO70343 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ppargc1aO70343 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ppargc1aO70343 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ppargc1aO70343 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ppargc1aO70343 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.51■■□□□ 1.51
Ppargc1aO70343 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.51■■□□□ 1.51
Ppargc1aO70343 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ppargc1aO70343 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Ppargc1aO70343 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ppargc1aO70343 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ppargc1aO70343 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.5■■□□□ 1.51
Ppargc1aO70343 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ppargc1aO70343 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ppargc1aO70343 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.49■■□□□ 1.51
Ppargc1aO70343 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ppargc1aO70343 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ppargc1aO70343 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ppargc1aO70343 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.48■■□□□ 1.51
Ppargc1aO70343 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.48■■□□□ 1.51
Ppargc1aO70343 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.48■■□□□ 1.51
Ppargc1aO70343 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.47■■□□□ 1.51
Ppargc1aO70343 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Ppargc1aO70343 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.47■■□□□ 1.51
Ppargc1aO70343 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ppargc1aO70343 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Ppargc1aO70343 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ppargc1aO70343 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ppargc1aO70343 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ppargc1aO70343 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Ppargc1aO70343 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.44■■□□□ 1.5
Ppargc1aO70343 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ppargc1aO70343 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ppargc1aO70343 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Ppargc1aO70343 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ppargc1aO70343 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ppargc1aO70343 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ppargc1aO70343 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ppargc1aO70343 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.41■■□□□ 1.5
Ppargc1aO70343 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ppargc1aO70343 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ppargc1aO70343 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.4■■□□□ 1.5
Ppargc1aO70343 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ppargc1aO70343 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Ppargc1aO70343 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ppargc1aO70343 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ppargc1aO70343 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.38■■□□□ 1.49
Ppargc1aO70343 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ppargc1aO70343 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ppargc1aO70343 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ppargc1aO70343 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ppargc1aO70343 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ppargc1aO70343 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ppargc1aO70343 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ppargc1aO70343 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.35■■□□□ 1.49
Ppargc1aO70343 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Ppargc1aO70343 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ppargc1aO70343 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ppargc1aO70343 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ppargc1aO70343 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Ppargc1aO70343 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
Ppargc1aO70343 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ppargc1aO70343 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.32■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms