Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Efnb3O35393 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.5■□□□□ 0.55
Efnb3O35393 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Efnb3O35393 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Efnb3O35393 Zfp131-205ENSMUST00000223812 663 ntBASIC18.5■□□□□ 0.55
Efnb3O35393 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Efnb3O35393 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Efnb3O35393 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Efnb3O35393 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Efnb3O35393 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Efnb3O35393 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Efnb3O35393 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Efnb3O35393 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Efnb3O35393 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Efnb3O35393 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Efnb3O35393 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Efnb3O35393 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Efnb3O35393 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Efnb3O35393 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Efnb3O35393 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Efnb3O35393 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Efnb3O35393 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Efnb3O35393 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.45■□□□□ 0.54
Efnb3O35393 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.45■□□□□ 0.54
Efnb3O35393 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Efnb3O35393 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Efnb3O35393 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Efnb3O35393 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Efnb3O35393 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Efnb3O35393 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Efnb3O35393 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.43■□□□□ 0.54
Efnb3O35393 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Efnb3O35393 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Efnb3O35393 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Efnb3O35393 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Efnb3O35393 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Efnb3O35393 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Efnb3O35393 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Efnb3O35393 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.41■□□□□ 0.54
Efnb3O35393 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.4■□□□□ 0.54
Efnb3O35393 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Efnb3O35393 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Efnb3O35393 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Efnb3O35393 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Efnb3O35393 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Efnb3O35393 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Efnb3O35393 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Efnb3O35393 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Efnb3O35393 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Efnb3O35393 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Efnb3O35393 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Efnb3O35393 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Efnb3O35393 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Efnb3O35393 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Efnb3O35393 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Efnb3O35393 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Efnb3O35393 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Efnb3O35393 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Efnb3O35393 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Efnb3O35393 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Efnb3O35393 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.37■□□□□ 0.53
Efnb3O35393 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Efnb3O35393 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Efnb3O35393 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Efnb3O35393 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Efnb3O35393 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Efnb3O35393 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Efnb3O35393 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.35■□□□□ 0.53
Efnb3O35393 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Efnb3O35393 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Efnb3O35393 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Efnb3O35393 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.34■□□□□ 0.53
Efnb3O35393 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Efnb3O35393 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Efnb3O35393 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Efnb3O35393 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Efnb3O35393 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Efnb3O35393 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Efnb3O35393 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Efnb3O35393 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Efnb3O35393 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Efnb3O35393 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Efnb3O35393 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Efnb3O35393 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Efnb3O35393 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Efnb3O35393 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Efnb3O35393 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Efnb3O35393 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Efnb3O35393 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Efnb3O35393 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Efnb3O35393 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Efnb3O35393 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Efnb3O35393 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.3■□□□□ 0.52
Efnb3O35393 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Efnb3O35393 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Efnb3O35393 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Efnb3O35393 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Efnb3O35393 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Efnb3O35393 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.28■□□□□ 0.52
Efnb3O35393 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms