Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trove2O08848 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.87■■□□□ 1.41
Trove2O08848 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trove2O08848 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.86■■□□□ 1.41
Trove2O08848 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trove2O08848 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Trove2O08848 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Trove2O08848 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.85■■□□□ 1.41
Trove2O08848 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trove2O08848 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trove2O08848 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Trove2O08848 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trove2O08848 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.83■■□□□ 1.41
Trove2O08848 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trove2O08848 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Trove2O08848 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trove2O08848 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trove2O08848 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trove2O08848 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trove2O08848 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trove2O08848 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trove2O08848 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.81■■□□□ 1.4
Trove2O08848 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.81■■□□□ 1.4
Trove2O08848 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trove2O08848 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trove2O08848 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Trove2O08848 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trove2O08848 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.8■■□□□ 1.4
Trove2O08848 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
Trove2O08848 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.8■■□□□ 1.4
Trove2O08848 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trove2O08848 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trove2O08848 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trove2O08848 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trove2O08848 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.79■■□□□ 1.4
Trove2O08848 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trove2O08848 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trove2O08848 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trove2O08848 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.39
Trove2O08848 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trove2O08848 Gm9397-201ENSMUST00000200125 605 ntBASIC23.75■■□□□ 1.39
Trove2O08848 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.75■■□□□ 1.39
Trove2O08848 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.73■■□□□ 1.39
Trove2O08848 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Trove2O08848 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trove2O08848 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.73■■□□□ 1.39
Trove2O08848 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.73■■□□□ 1.39
Trove2O08848 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Trove2O08848 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trove2O08848 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trove2O08848 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trove2O08848 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trove2O08848 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trove2O08848 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.72■■□□□ 1.39
Trove2O08848 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.72■■□□□ 1.39
Trove2O08848 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trove2O08848 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Trove2O08848 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trove2O08848 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trove2O08848 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trove2O08848 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Trove2O08848 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Trove2O08848 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
Trove2O08848 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trove2O08848 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trove2O08848 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.69■■□□□ 1.38
Trove2O08848 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trove2O08848 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trove2O08848 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Trove2O08848 Gm45855-201ENSMUST00000212546 880 ntBASIC23.68■■□□□ 1.38
Trove2O08848 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.68■■□□□ 1.38
Trove2O08848 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Trove2O08848 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Trove2O08848 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Trove2O08848 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Trove2O08848 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trove2O08848 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Trove2O08848 Gm24970-201ENSMUST00000175582 82 ntBASIC23.66■■□□□ 1.38
Trove2O08848 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trove2O08848 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trove2O08848 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trove2O08848 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Trove2O08848 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Trove2O08848 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.64■■□□□ 1.37
Trove2O08848 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trove2O08848 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
Trove2O08848 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trove2O08848 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.63■■□□□ 1.37
Trove2O08848 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.63■■□□□ 1.37
Trove2O08848 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trove2O08848 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Trove2O08848 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trove2O08848 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trove2O08848 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trove2O08848 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Trove2O08848 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Trove2O08848 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trove2O08848 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Trove2O08848 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trove2O08848 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms