Protein–RNA interactions for Protein: J3QPE5

Gm5849, Predicted gene 5849, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5849J3QPE5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm5849J3QPE5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm5849J3QPE5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm5849J3QPE5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm5849J3QPE5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm5849J3QPE5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm5849J3QPE5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.61■□□□□ 0.73
Gm5849J3QPE5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Gm5849J3QPE5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm5849J3QPE5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Gm5849J3QPE5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Gm5849J3QPE5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm5849J3QPE5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm5849J3QPE5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.58■□□□□ 0.72
Gm5849J3QPE5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm5849J3QPE5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm5849J3QPE5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm5849J3QPE5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm5849J3QPE5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gm5849J3QPE5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm5849J3QPE5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Gm5849J3QPE5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm5849J3QPE5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm5849J3QPE5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm5849J3QPE5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.56■□□□□ 0.72
Gm5849J3QPE5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.55■□□□□ 0.72
Gm5849J3QPE5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm5849J3QPE5 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.55■□□□□ 0.72
Gm5849J3QPE5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm5849J3QPE5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm5849J3QPE5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Gm5849J3QPE5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5849J3QPE5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.54■□□□□ 0.72
Gm5849J3QPE5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5849J3QPE5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5849J3QPE5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm5849J3QPE5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Gm5849J3QPE5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5849J3QPE5 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.53■□□□□ 0.72
Gm5849J3QPE5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm5849J3QPE5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.53■□□□□ 0.72
Gm5849J3QPE5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm5849J3QPE5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm5849J3QPE5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm5849J3QPE5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Gm5849J3QPE5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Gm5849J3QPE5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm5849J3QPE5 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Gm5849J3QPE5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5849J3QPE5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5849J3QPE5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5849J3QPE5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5849J3QPE5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5849J3QPE5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Gm5849J3QPE5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm5849J3QPE5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5849J3QPE5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5849J3QPE5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5849J3QPE5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm5849J3QPE5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5849J3QPE5 Gm25238-201ENSMUST00000174914 89 ntBASIC19.48■□□□□ 0.71
Gm5849J3QPE5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5849J3QPE5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5849J3QPE5 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm5849J3QPE5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Gm5849J3QPE5 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.47■□□□□ 0.71
Gm5849J3QPE5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm5849J3QPE5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm5849J3QPE5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm5849J3QPE5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm5849J3QPE5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm5849J3QPE5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Gm5849J3QPE5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5849J3QPE5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5849J3QPE5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5849J3QPE5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.45■□□□□ 0.7
Gm5849J3QPE5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Gm5849J3QPE5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5849J3QPE5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gm5849J3QPE5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5849J3QPE5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.43■□□□□ 0.7
Gm5849J3QPE5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.43■□□□□ 0.7
Gm5849J3QPE5 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5849J3QPE5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5849J3QPE5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5849J3QPE5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5849J3QPE5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5849J3QPE5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5849J3QPE5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5849J3QPE5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5849J3QPE5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Gm5849J3QPE5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5849J3QPE5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Gm5849J3QPE5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gm5849J3QPE5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm5849J3QPE5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Gm5849J3QPE5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.7
Gm5849J3QPE5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm5849J3QPE5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.39■□□□□ 0.69
Gm5849J3QPE5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 242 ms