Protein–RNA interactions for Protein: J3QM43

Gm6594, Predicted pseudogene 6594, mousemouse

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6594J3QM43 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gm6594J3QM43 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gm6594J3QM43 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gm6594J3QM43 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Gm6594J3QM43 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm6594J3QM43 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm6594J3QM43 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm6594J3QM43 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm6594J3QM43 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm6594J3QM43 Gm30023-201ENSMUST00000197970 889 ntBASIC19.63■□□□□ 0.73
Gm6594J3QM43 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gm6594J3QM43 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm6594J3QM43 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Gm6594J3QM43 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.62■□□□□ 0.73
Gm6594J3QM43 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm6594J3QM43 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm6594J3QM43 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Gm6594J3QM43 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm6594J3QM43 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm6594J3QM43 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm6594J3QM43 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm6594J3QM43 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Gm6594J3QM43 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm6594J3QM43 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm6594J3QM43 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm6594J3QM43 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm6594J3QM43 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm6594J3QM43 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm6594J3QM43 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm6594J3QM43 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gm6594J3QM43 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Gm6594J3QM43 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm6594J3QM43 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.57■□□□□ 0.72
Gm6594J3QM43 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm6594J3QM43 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm6594J3QM43 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm6594J3QM43 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.56■□□□□ 0.72
Gm6594J3QM43 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm6594J3QM43 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm6594J3QM43 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm6594J3QM43 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm6594J3QM43 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm6594J3QM43 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm6594J3QM43 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm6594J3QM43 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm6594J3QM43 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm6594J3QM43 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.53■□□□□ 0.72
Gm6594J3QM43 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.53■□□□□ 0.72
Gm6594J3QM43 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.52■□□□□ 0.72
Gm6594J3QM43 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm6594J3QM43 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm6594J3QM43 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm6594J3QM43 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm6594J3QM43 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm6594J3QM43 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm6594J3QM43 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm6594J3QM43 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm6594J3QM43 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm6594J3QM43 Particl-201ENSMUST00000205370 1560 ntBASIC19.49■□□□□ 0.71
Gm6594J3QM43 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.48■□□□□ 0.71
Gm6594J3QM43 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm6594J3QM43 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm6594J3QM43 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm6594J3QM43 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm6594J3QM43 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Gm6594J3QM43 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm6594J3QM43 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm6594J3QM43 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.46■□□□□ 0.71
Gm6594J3QM43 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm6594J3QM43 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Gm6594J3QM43 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm6594J3QM43 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm6594J3QM43 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm6594J3QM43 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm6594J3QM43 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm6594J3QM43 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm6594J3QM43 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm6594J3QM43 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm6594J3QM43 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Gm6594J3QM43 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gm6594J3QM43 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm6594J3QM43 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm6594J3QM43 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm6594J3QM43 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm6594J3QM43 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm6594J3QM43 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm6594J3QM43 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Gm6594J3QM43 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm6594J3QM43 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm6594J3QM43 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm6594J3QM43 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm6594J3QM43 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm6594J3QM43 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm6594J3QM43 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm6594J3QM43 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm6594J3QM43 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm6594J3QM43 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm6594J3QM43 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Gm6594J3QM43 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Gm6594J3QM43 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms