Protein–RNA interactions for Protein: J3KMS0

Gm21411, Predicted gene, 21411, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21411J3KMS0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Gm21411J3KMS0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm21411J3KMS0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm21411J3KMS0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Gm21411J3KMS0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm21411J3KMS0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
Gm21411J3KMS0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm21411J3KMS0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm21411J3KMS0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm21411J3KMS0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm21411J3KMS0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm21411J3KMS0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Gm21411J3KMS0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm21411J3KMS0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm21411J3KMS0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Gm21411J3KMS0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gm21411J3KMS0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Gm21411J3KMS0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.08■□□□□ 0.97
Gm21411J3KMS0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm21411J3KMS0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Gm21411J3KMS0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm21411J3KMS0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm21411J3KMS0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm21411J3KMS0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gm21411J3KMS0 Gm6821-201ENSMUST00000107540 542 ntBASIC21.06■□□□□ 0.96
Gm21411J3KMS0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Gm21411J3KMS0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm21411J3KMS0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm21411J3KMS0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.05■□□□□ 0.96
Gm21411J3KMS0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm21411J3KMS0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gm21411J3KMS0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm21411J3KMS0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm21411J3KMS0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.03■□□□□ 0.96
Gm21411J3KMS0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm21411J3KMS0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Gm21411J3KMS0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Gm21411J3KMS0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.01■□□□□ 0.95
Gm21411J3KMS0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm21411J3KMS0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm21411J3KMS0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm21411J3KMS0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Gm21411J3KMS0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm21411J3KMS0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.99■□□□□ 0.95
Gm21411J3KMS0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Gm21411J3KMS0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Gm21411J3KMS0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm21411J3KMS0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm21411J3KMS0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm21411J3KMS0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.97■□□□□ 0.95
Gm21411J3KMS0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.97■□□□□ 0.95
Gm21411J3KMS0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.97■□□□□ 0.95
Gm21411J3KMS0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm21411J3KMS0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm21411J3KMS0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Gm21411J3KMS0 Gm8503-201ENSMUST00000118131 455 ntBASIC20.96■□□□□ 0.95
Gm21411J3KMS0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.96■□□□□ 0.95
Gm21411J3KMS0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.96■□□□□ 0.95
Gm21411J3KMS0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gm21411J3KMS0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm21411J3KMS0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gm21411J3KMS0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm21411J3KMS0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.94■□□□□ 0.94
Gm21411J3KMS0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm21411J3KMS0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm21411J3KMS0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gm21411J3KMS0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gm21411J3KMS0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gm21411J3KMS0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Gm21411J3KMS0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gm21411J3KMS0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm21411J3KMS0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm21411J3KMS0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm21411J3KMS0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gm21411J3KMS0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm21411J3KMS0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm21411J3KMS0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Gm21411J3KMS0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm21411J3KMS0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm21411J3KMS0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.9■□□□□ 0.94
Gm21411J3KMS0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gm21411J3KMS0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.89■□□□□ 0.93
Gm21411J3KMS0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
Gm21411J3KMS0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm21411J3KMS0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm21411J3KMS0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm21411J3KMS0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm21411J3KMS0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.87■□□□□ 0.93
Gm21411J3KMS0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.87■□□□□ 0.93
Gm21411J3KMS0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Gm21411J3KMS0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm21411J3KMS0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm21411J3KMS0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm21411J3KMS0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.86■□□□□ 0.93
Gm21411J3KMS0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gm21411J3KMS0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm21411J3KMS0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Gm21411J3KMS0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm21411J3KMS0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm21411J3KMS0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 202.5 ms