Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Gm7432-201ENSMUST00000210343 879 ntBASIC21.22■□□□□ 0.99
Gm3543D3Z235 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3543D3Z235 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3543D3Z235 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3543D3Z235 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3543D3Z235 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Gm3543D3Z235 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3543D3Z235 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3543D3Z235 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3543D3Z235 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3543D3Z235 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3543D3Z235 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3543D3Z235 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3543D3Z235 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3543D3Z235 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3543D3Z235 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.16■□□□□ 0.98
Gm3543D3Z235 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3543D3Z235 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Gm3543D3Z235 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3543D3Z235 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.15■□□□□ 0.98
Gm3543D3Z235 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.15■□□□□ 0.98
Gm3543D3Z235 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.15■□□□□ 0.98
Gm3543D3Z235 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Gm3543D3Z235 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3543D3Z235 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3543D3Z235 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.13■□□□□ 0.97
Gm3543D3Z235 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3543D3Z235 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Gm3543D3Z235 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.13■□□□□ 0.97
Gm3543D3Z235 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Gm3543D3Z235 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.11■□□□□ 0.97
Gm3543D3Z235 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Gm3543D3Z235 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3543D3Z235 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3543D3Z235 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Gm3543D3Z235 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm3543D3Z235 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm3543D3Z235 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.09■□□□□ 0.97
Gm3543D3Z235 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm3543D3Z235 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gm3543D3Z235 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.09■□□□□ 0.97
Gm3543D3Z235 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.08■□□□□ 0.97
Gm3543D3Z235 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
Gm3543D3Z235 Gm30023-201ENSMUST00000197970 889 ntBASIC21.08■□□□□ 0.97
Gm3543D3Z235 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm3543D3Z235 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm3543D3Z235 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Gm3543D3Z235 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3543D3Z235 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.07■□□□□ 0.96
Gm3543D3Z235 Gm11599-201ENSMUST00000118720 878 ntBASIC21.07■□□□□ 0.96
Gm3543D3Z235 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3543D3Z235 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3543D3Z235 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3543D3Z235 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3543D3Z235 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3543D3Z235 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3543D3Z235 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3543D3Z235 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3543D3Z235 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3543D3Z235 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3543D3Z235 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm3543D3Z235 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
Gm3543D3Z235 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Gm3543D3Z235 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm3543D3Z235 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm3543D3Z235 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm3543D3Z235 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Gm3543D3Z235 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Gm3543D3Z235 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm3543D3Z235 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Gm3543D3Z235 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm3543D3Z235 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm3543D3Z235 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21■□□□□ 0.95
Gm3543D3Z235 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm3543D3Z235 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Gm3543D3Z235 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm3543D3Z235 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Gm3543D3Z235 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.99■□□□□ 0.95
Gm3543D3Z235 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Gm3543D3Z235 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Gm3543D3Z235 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm3543D3Z235 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm3543D3Z235 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm3543D3Z235 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.98■□□□□ 0.95
Gm3543D3Z235 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm3543D3Z235 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm3543D3Z235 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.97■□□□□ 0.95
Gm3543D3Z235 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Gm3543D3Z235 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm3543D3Z235 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gm3543D3Z235 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gm3543D3Z235 Particl-201ENSMUST00000205370 1560 ntBASIC20.94■□□□□ 0.94
Gm3543D3Z235 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Gm3543D3Z235 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm3543D3Z235 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm3543D3Z235 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm3543D3Z235 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Gm3543D3Z235 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.92■□□□□ 0.94
Gm3543D3Z235 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm3543D3Z235 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms