Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Gm12887B1AVM1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm12887B1AVM1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gm12887B1AVM1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm12887B1AVM1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm12887B1AVM1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm12887B1AVM1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Gm12887B1AVM1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm12887B1AVM1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm12887B1AVM1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.98■□□□□ 0.63
Gm12887B1AVM1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm12887B1AVM1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Gm12887B1AVM1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm12887B1AVM1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gm12887B1AVM1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm12887B1AVM1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm12887B1AVM1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.96■□□□□ 0.63
Gm12887B1AVM1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm12887B1AVM1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Gm12887B1AVM1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm12887B1AVM1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Gm12887B1AVM1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm12887B1AVM1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gm12887B1AVM1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm12887B1AVM1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm12887B1AVM1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Gm12887B1AVM1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.94■□□□□ 0.62
Gm12887B1AVM1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gm12887B1AVM1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Gm12887B1AVM1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm12887B1AVM1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.94■□□□□ 0.62
Gm12887B1AVM1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Gm12887B1AVM1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Gm12887B1AVM1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm12887B1AVM1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm12887B1AVM1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm12887B1AVM1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.92■□□□□ 0.62
Gm12887B1AVM1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm12887B1AVM1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.92■□□□□ 0.62
Gm12887B1AVM1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm12887B1AVM1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm12887B1AVM1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm12887B1AVM1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm12887B1AVM1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm12887B1AVM1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Gm12887B1AVM1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Gm12887B1AVM1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm12887B1AVM1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm12887B1AVM1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm12887B1AVM1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm12887B1AVM1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm12887B1AVM1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm12887B1AVM1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Gm12887B1AVM1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Gm12887B1AVM1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm12887B1AVM1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm12887B1AVM1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm12887B1AVM1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm12887B1AVM1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Gm12887B1AVM1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.87■□□□□ 0.61
Gm12887B1AVM1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm12887B1AVM1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm12887B1AVM1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Gm12887B1AVM1 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.86■□□□□ 0.61
Gm12887B1AVM1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm12887B1AVM1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Gm12887B1AVM1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm12887B1AVM1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm12887B1AVM1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm12887B1AVM1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Gm12887B1AVM1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm12887B1AVM1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm12887B1AVM1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm12887B1AVM1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm12887B1AVM1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm12887B1AVM1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm12887B1AVM1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm12887B1AVM1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm12887B1AVM1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm12887B1AVM1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm12887B1AVM1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm12887B1AVM1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm12887B1AVM1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm12887B1AVM1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.81■□□□□ 0.6
Gm12887B1AVM1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm12887B1AVM1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.81■□□□□ 0.6
Gm12887B1AVM1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm12887B1AVM1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm12887B1AVM1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Gm12887B1AVM1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm12887B1AVM1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm12887B1AVM1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm12887B1AVM1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm12887B1AVM1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Gm12887B1AVM1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm12887B1AVM1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm12887B1AVM1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm12887B1AVM1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Gm12887B1AVM1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm12887B1AVM1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms