Protein–RNA interactions for Protein: A1L0T3

Ssc4d, Scavenger receptor cysteine-rich domain-containing group B protein, mousemouse

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssc4dA1L0T3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.17■■□□□ 1.3
Ssc4dA1L0T3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ssc4dA1L0T3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ssc4dA1L0T3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ssc4dA1L0T3 Amer2-203ENSMUST00000225247 2662 ntBASIC23.14■■□□□ 1.29
Ssc4dA1L0T3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ssc4dA1L0T3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ssc4dA1L0T3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.13■■□□□ 1.29
Ssc4dA1L0T3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ssc4dA1L0T3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ssc4dA1L0T3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ssc4dA1L0T3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ssc4dA1L0T3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ssc4dA1L0T3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ssc4dA1L0T3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ssc4dA1L0T3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.09■■□□□ 1.29
Ssc4dA1L0T3 Gm11175-201ENSMUST00000116172 543 ntBASIC23.09■■□□□ 1.29
Ssc4dA1L0T3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Ssc4dA1L0T3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Ssc4dA1L0T3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ssc4dA1L0T3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Ssc4dA1L0T3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ssc4dA1L0T3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
Ssc4dA1L0T3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ssc4dA1L0T3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Ssc4dA1L0T3 Gm6311-201ENSMUST00000073790 878 ntBASIC23.05■■□□□ 1.28
Ssc4dA1L0T3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.04■■□□□ 1.28
Ssc4dA1L0T3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Ssc4dA1L0T3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ssc4dA1L0T3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.03■■□□□ 1.28
Ssc4dA1L0T3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
Ssc4dA1L0T3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ssc4dA1L0T3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ssc4dA1L0T3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Ssc4dA1L0T3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ssc4dA1L0T3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Ssc4dA1L0T3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.02■■□□□ 1.28
Ssc4dA1L0T3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Ssc4dA1L0T3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.01■■□□□ 1.27
Ssc4dA1L0T3 Gm37136-201ENSMUST00000194368 194 ntBASIC23.01■■□□□ 1.27
Ssc4dA1L0T3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Ssc4dA1L0T3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ssc4dA1L0T3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
Ssc4dA1L0T3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.99■■□□□ 1.27
Ssc4dA1L0T3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ssc4dA1L0T3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.99■■□□□ 1.27
Ssc4dA1L0T3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ssc4dA1L0T3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ssc4dA1L0T3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Ssc4dA1L0T3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ssc4dA1L0T3 Mir6538-201ENSMUST00000183713 110 ntBASIC22.96■■□□□ 1.27
Ssc4dA1L0T3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ssc4dA1L0T3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.96■■□□□ 1.27
Ssc4dA1L0T3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ssc4dA1L0T3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Ssc4dA1L0T3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ssc4dA1L0T3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.93■■□□□ 1.26
Ssc4dA1L0T3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ssc4dA1L0T3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ssc4dA1L0T3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ssc4dA1L0T3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ssc4dA1L0T3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ssc4dA1L0T3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ssc4dA1L0T3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ssc4dA1L0T3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ssc4dA1L0T3 Gm4799-201ENSMUST00000095396 657 ntBASIC22.91■■□□□ 1.26
Ssc4dA1L0T3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ssc4dA1L0T3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ssc4dA1L0T3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ssc4dA1L0T3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ssc4dA1L0T3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ssc4dA1L0T3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ssc4dA1L0T3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ssc4dA1L0T3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Ssc4dA1L0T3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ssc4dA1L0T3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Ssc4dA1L0T3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ssc4dA1L0T3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ssc4dA1L0T3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.88■■□□□ 1.25
Ssc4dA1L0T3 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.87■■□□□ 1.25
Ssc4dA1L0T3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ssc4dA1L0T3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.87■■□□□ 1.25
Ssc4dA1L0T3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ssc4dA1L0T3 Mir3960-201ENSMUST00000198213 73 ntBASIC22.86■■□□□ 1.25
Ssc4dA1L0T3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ssc4dA1L0T3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ssc4dA1L0T3 Gm45364-201ENSMUST00000210883 159 ntBASIC22.83■■□□□ 1.25
Ssc4dA1L0T3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ssc4dA1L0T3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ssc4dA1L0T3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.83■■□□□ 1.25
Ssc4dA1L0T3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ssc4dA1L0T3 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.82■■□□□ 1.24
Ssc4dA1L0T3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ssc4dA1L0T3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Ssc4dA1L0T3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ssc4dA1L0T3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ssc4dA1L0T3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.81■■□□□ 1.24
Ssc4dA1L0T3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ssc4dA1L0T3 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.8■■□□□ 1.24
Ssc4dA1L0T3 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.8■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 197.8 ms