Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smim17A0A504 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smim17A0A504 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Smim17A0A504 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Smim17A0A504 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Smim17A0A504 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Smim17A0A504 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smim17A0A504 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smim17A0A504 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smim17A0A504 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smim17A0A504 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Smim17A0A504 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smim17A0A504 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smim17A0A504 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Smim17A0A504 Gm25262-201ENSMUST00000174934 133 ntBASIC21.3■■□□□ 1
Smim17A0A504 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.29■■□□□ 1
Smim17A0A504 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Smim17A0A504 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.28■■□□□ 1
Smim17A0A504 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Smim17A0A504 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Smim17A0A504 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smim17A0A504 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Smim17A0A504 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Smim17A0A504 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smim17A0A504 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Smim17A0A504 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Smim17A0A504 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Smim17A0A504 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smim17A0A504 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smim17A0A504 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smim17A0A504 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smim17A0A504 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smim17A0A504 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smim17A0A504 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smim17A0A504 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Smim17A0A504 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Smim17A0A504 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smim17A0A504 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Smim17A0A504 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smim17A0A504 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Smim17A0A504 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Smim17A0A504 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smim17A0A504 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.23■□□□□ 0.99
Smim17A0A504 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smim17A0A504 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smim17A0A504 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smim17A0A504 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smim17A0A504 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.22■□□□□ 0.99
Smim17A0A504 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smim17A0A504 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smim17A0A504 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smim17A0A504 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smim17A0A504 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smim17A0A504 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smim17A0A504 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smim17A0A504 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smim17A0A504 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smim17A0A504 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Smim17A0A504 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smim17A0A504 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Smim17A0A504 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.18■□□□□ 0.98
Smim17A0A504 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smim17A0A504 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smim17A0A504 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smim17A0A504 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
Smim17A0A504 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smim17A0A504 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smim17A0A504 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.17■□□□□ 0.98
Smim17A0A504 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smim17A0A504 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Smim17A0A504 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smim17A0A504 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smim17A0A504 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smim17A0A504 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smim17A0A504 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smim17A0A504 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smim17A0A504 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smim17A0A504 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.13■□□□□ 0.97
Smim17A0A504 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smim17A0A504 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Smim17A0A504 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Smim17A0A504 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smim17A0A504 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Smim17A0A504 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smim17A0A504 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smim17A0A504 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Smim17A0A504 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smim17A0A504 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smim17A0A504 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Smim17A0A504 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smim17A0A504 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smim17A0A504 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Smim17A0A504 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smim17A0A504 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smim17A0A504 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.09■□□□□ 0.97
Smim17A0A504 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smim17A0A504 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smim17A0A504 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smim17A0A504 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smim17A0A504 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms