Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.91■□□□□ 0.46
Trbv17A0A140T8P8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv17A0A140T8P8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.9■□□□□ 0.46
Trbv17A0A140T8P8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trbv17A0A140T8P8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv17A0A140T8P8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trbv17A0A140T8P8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv17A0A140T8P8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv17A0A140T8P8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv17A0A140T8P8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv17A0A140T8P8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv17A0A140T8P8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv17A0A140T8P8 Nkain2-201ENSMUST00000092602 558 ntBASIC17.88■□□□□ 0.45
Trbv17A0A140T8P8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv17A0A140T8P8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trbv17A0A140T8P8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv17A0A140T8P8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv17A0A140T8P8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv17A0A140T8P8 Gm30023-201ENSMUST00000197970 889 ntBASIC17.86■□□□□ 0.45
Trbv17A0A140T8P8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.86■□□□□ 0.45
Trbv17A0A140T8P8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv17A0A140T8P8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv17A0A140T8P8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.85■□□□□ 0.45
Trbv17A0A140T8P8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv17A0A140T8P8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv17A0A140T8P8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trbv17A0A140T8P8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trbv17A0A140T8P8 Gm6821-201ENSMUST00000107540 542 ntBASIC17.84■□□□□ 0.45
Trbv17A0A140T8P8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv17A0A140T8P8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Trbv17A0A140T8P8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
Trbv17A0A140T8P8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.83■□□□□ 0.44
Trbv17A0A140T8P8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv17A0A140T8P8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv17A0A140T8P8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trbv17A0A140T8P8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv17A0A140T8P8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Trbv17A0A140T8P8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trbv17A0A140T8P8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv17A0A140T8P8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv17A0A140T8P8 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.81■□□□□ 0.44
Trbv17A0A140T8P8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.8■□□□□ 0.44
Trbv17A0A140T8P8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv17A0A140T8P8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Trbv17A0A140T8P8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv17A0A140T8P8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Trbv17A0A140T8P8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv17A0A140T8P8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv17A0A140T8P8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv17A0A140T8P8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv17A0A140T8P8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv17A0A140T8P8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv17A0A140T8P8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.78■□□□□ 0.44
Trbv17A0A140T8P8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv17A0A140T8P8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv17A0A140T8P8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trbv17A0A140T8P8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trbv17A0A140T8P8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trbv17A0A140T8P8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Trbv17A0A140T8P8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv17A0A140T8P8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv17A0A140T8P8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv17A0A140T8P8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trbv17A0A140T8P8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv17A0A140T8P8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv17A0A140T8P8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv17A0A140T8P8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv17A0A140T8P8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv17A0A140T8P8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv17A0A140T8P8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv17A0A140T8P8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trbv17A0A140T8P8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.74■□□□□ 0.43
Trbv17A0A140T8P8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.74■□□□□ 0.43
Trbv17A0A140T8P8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv17A0A140T8P8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv17A0A140T8P8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv17A0A140T8P8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv17A0A140T8P8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv17A0A140T8P8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv17A0A140T8P8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv17A0A140T8P8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv17A0A140T8P8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.73■□□□□ 0.43
Trbv17A0A140T8P8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.72■□□□□ 0.43
Trbv17A0A140T8P8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.72■□□□□ 0.43
Trbv17A0A140T8P8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv17A0A140T8P8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.72■□□□□ 0.43
Trbv17A0A140T8P8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv17A0A140T8P8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv17A0A140T8P8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv17A0A140T8P8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.7■□□□□ 0.42
Trbv17A0A140T8P8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv17A0A140T8P8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.69■□□□□ 0.42
Trbv17A0A140T8P8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.69■□□□□ 0.42
Trbv17A0A140T8P8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv17A0A140T8P8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.68■□□□□ 0.42
Trbv17A0A140T8P8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv17A0A140T8P8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv17A0A140T8P8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trbv17A0A140T8P8 Gm8503-201ENSMUST00000118131 455 ntBASIC17.67■□□□□ 0.42
Trbv17A0A140T8P8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms