Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.91■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Gm11599-201ENSMUST00000118720 878 ntBASIC16.9■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.9■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Trav13n-1A0A0G2JEU8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Gm30023-201ENSMUST00000197970 889 ntBASIC16.89■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.89■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav13n-1A0A0G2JEU8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.88■□□□□ 0.29
Trav13n-1A0A0G2JEU8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.88■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13n-1A0A0G2JEU8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13n-1A0A0G2JEU8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13n-1A0A0G2JEU8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav13n-1A0A0G2JEU8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-1A0A0G2JEU8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav13n-1A0A0G2JEU8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav13n-1A0A0G2JEU8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav13n-1A0A0G2JEU8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.79■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.79■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Particl-201ENSMUST00000205370 1560 ntBASIC16.77■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav13n-1A0A0G2JEU8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.77■□□□□ 0.28
Trav13n-1A0A0G2JEU8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.77■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.75■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13n-1A0A0G2JEU8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13n-1A0A0G2JEU8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13n-1A0A0G2JEU8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav13n-1A0A0G2JEU8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13n-1A0A0G2JEU8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms