Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv9-3A0A0B4J1J5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv9-3A0A0B4J1J5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.61■□□□□ 0.73
Ighv9-3A0A0B4J1J5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ighv9-3A0A0B4J1J5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv9-3A0A0B4J1J5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv9-3A0A0B4J1J5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ighv9-3A0A0B4J1J5 Gm7432-201ENSMUST00000210343 879 ntBASIC19.6■□□□□ 0.73
Ighv9-3A0A0B4J1J5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv9-3A0A0B4J1J5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ighv9-3A0A0B4J1J5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv9-3A0A0B4J1J5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv9-3A0A0B4J1J5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv9-3A0A0B4J1J5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv9-3A0A0B4J1J5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ighv9-3A0A0B4J1J5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ighv9-3A0A0B4J1J5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.57■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv9-3A0A0B4J1J5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.55■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv9-3A0A0B4J1J5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv9-3A0A0B4J1J5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.55■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Ighv9-3A0A0B4J1J5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ighv9-3A0A0B4J1J5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
Ighv9-3A0A0B4J1J5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ighv9-3A0A0B4J1J5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ighv9-3A0A0B4J1J5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ighv9-3A0A0B4J1J5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ighv9-3A0A0B4J1J5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.51■□□□□ 0.71
Ighv9-3A0A0B4J1J5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.51■□□□□ 0.71
Ighv9-3A0A0B4J1J5 Particl-201ENSMUST00000205370 1560 ntBASIC19.51■□□□□ 0.71
Ighv9-3A0A0B4J1J5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Ighv9-3A0A0B4J1J5 Gm11599-201ENSMUST00000118720 878 ntBASIC19.5■□□□□ 0.71
Ighv9-3A0A0B4J1J5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ighv9-3A0A0B4J1J5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.49■□□□□ 0.71
Ighv9-3A0A0B4J1J5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv9-3A0A0B4J1J5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.49■□□□□ 0.71
Ighv9-3A0A0B4J1J5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv9-3A0A0B4J1J5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.48■□□□□ 0.71
Ighv9-3A0A0B4J1J5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.46■□□□□ 0.71
Ighv9-3A0A0B4J1J5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv9-3A0A0B4J1J5 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.46■□□□□ 0.71
Ighv9-3A0A0B4J1J5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.46■□□□□ 0.71
Ighv9-3A0A0B4J1J5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv9-3A0A0B4J1J5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv9-3A0A0B4J1J5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ighv9-3A0A0B4J1J5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ighv9-3A0A0B4J1J5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ighv9-3A0A0B4J1J5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.44■□□□□ 0.7
Ighv9-3A0A0B4J1J5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ighv9-3A0A0B4J1J5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ighv9-3A0A0B4J1J5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.44■□□□□ 0.7
Ighv9-3A0A0B4J1J5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ighv9-3A0A0B4J1J5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv9-3A0A0B4J1J5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv9-3A0A0B4J1J5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv9-3A0A0B4J1J5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ighv9-3A0A0B4J1J5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ighv9-3A0A0B4J1J5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ighv9-3A0A0B4J1J5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv9-3A0A0B4J1J5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv9-3A0A0B4J1J5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ighv9-3A0A0B4J1J5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ighv9-3A0A0B4J1J5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ighv9-3A0A0B4J1J5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ighv9-3A0A0B4J1J5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ighv9-3A0A0B4J1J5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ighv9-3A0A0B4J1J5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.37■□□□□ 0.69
Ighv9-3A0A0B4J1J5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ighv9-3A0A0B4J1J5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ighv9-3A0A0B4J1J5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv9-3A0A0B4J1J5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv9-3A0A0B4J1J5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv9-3A0A0B4J1J5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.34■□□□□ 0.69
Ighv9-3A0A0B4J1J5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ighv9-3A0A0B4J1J5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv9-3A0A0B4J1J5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ighv9-3A0A0B4J1J5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.32■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv9-3A0A0B4J1J5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms