Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdh7A0A0A6YY83 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.47■■□□□ 1.51
Pcdh7A0A0A6YY83 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.47■■□□□ 1.51
Pcdh7A0A0A6YY83 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdh7A0A0A6YY83 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdh7A0A0A6YY83 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdh7A0A0A6YY83 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdh7A0A0A6YY83 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdh7A0A0A6YY83 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Pcdh7A0A0A6YY83 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdh7A0A0A6YY83 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.43■■□□□ 1.5
Pcdh7A0A0A6YY83 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdh7A0A0A6YY83 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.42■■□□□ 1.5
Pcdh7A0A0A6YY83 Gm8503-201ENSMUST00000118131 455 ntBASIC24.42■■□□□ 1.5
Pcdh7A0A0A6YY83 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.41■■□□□ 1.5
Pcdh7A0A0A6YY83 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdh7A0A0A6YY83 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdh7A0A0A6YY83 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdh7A0A0A6YY83 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.4■■□□□ 1.5
Pcdh7A0A0A6YY83 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdh7A0A0A6YY83 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdh7A0A0A6YY83 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.39■■□□□ 1.49
Pcdh7A0A0A6YY83 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Pcdh7A0A0A6YY83 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdh7A0A0A6YY83 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Pcdh7A0A0A6YY83 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdh7A0A0A6YY83 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.37■■□□□ 1.49
Pcdh7A0A0A6YY83 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdh7A0A0A6YY83 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdh7A0A0A6YY83 Particl-201ENSMUST00000205370 1560 ntBASIC24.34■■□□□ 1.49
Pcdh7A0A0A6YY83 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.34■■□□□ 1.49
Pcdh7A0A0A6YY83 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.34■■□□□ 1.49
Pcdh7A0A0A6YY83 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.34■■□□□ 1.49
Pcdh7A0A0A6YY83 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.34■■□□□ 1.49
Pcdh7A0A0A6YY83 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdh7A0A0A6YY83 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdh7A0A0A6YY83 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdh7A0A0A6YY83 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdh7A0A0A6YY83 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdh7A0A0A6YY83 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdh7A0A0A6YY83 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.29■■□□□ 1.48
Pcdh7A0A0A6YY83 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.29■■□□□ 1.48
Pcdh7A0A0A6YY83 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdh7A0A0A6YY83 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdh7A0A0A6YY83 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.28■■□□□ 1.48
Pcdh7A0A0A6YY83 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdh7A0A0A6YY83 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdh7A0A0A6YY83 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdh7A0A0A6YY83 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdh7A0A0A6YY83 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Pcdh7A0A0A6YY83 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Pcdh7A0A0A6YY83 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdh7A0A0A6YY83 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdh7A0A0A6YY83 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Pcdh7A0A0A6YY83 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.25■■□□□ 1.47
Pcdh7A0A0A6YY83 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdh7A0A0A6YY83 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdh7A0A0A6YY83 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Pcdh7A0A0A6YY83 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Pcdh7A0A0A6YY83 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdh7A0A0A6YY83 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdh7A0A0A6YY83 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdh7A0A0A6YY83 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.22■■□□□ 1.47
Pcdh7A0A0A6YY83 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdh7A0A0A6YY83 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdh7A0A0A6YY83 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Pcdh7A0A0A6YY83 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdh7A0A0A6YY83 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdh7A0A0A6YY83 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdh7A0A0A6YY83 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.21■■□□□ 1.47
Pcdh7A0A0A6YY83 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdh7A0A0A6YY83 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdh7A0A0A6YY83 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Pcdh7A0A0A6YY83 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdh7A0A0A6YY83 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Pcdh7A0A0A6YY83 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdh7A0A0A6YY83 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Pcdh7A0A0A6YY83 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdh7A0A0A6YY83 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdh7A0A0A6YY83 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdh7A0A0A6YY83 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdh7A0A0A6YY83 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdh7A0A0A6YY83 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdh7A0A0A6YY83 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.14■■□□□ 1.45
Pcdh7A0A0A6YY83 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.14■■□□□ 1.45
Pcdh7A0A0A6YY83 Gm37136-201ENSMUST00000194368 194 ntBASIC24.13■■□□□ 1.45
Pcdh7A0A0A6YY83 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdh7A0A0A6YY83 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdh7A0A0A6YY83 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Pcdh7A0A0A6YY83 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
Pcdh7A0A0A6YY83 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.12■■□□□ 1.45
Pcdh7A0A0A6YY83 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.11■■□□□ 1.45
Pcdh7A0A0A6YY83 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdh7A0A0A6YY83 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdh7A0A0A6YY83 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Pcdh7A0A0A6YY83 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdh7A0A0A6YY83 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdh7A0A0A6YY83 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdh7A0A0A6YY83 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.1■■□□□ 1.45
Pcdh7A0A0A6YY83 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.1■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms