Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ighv3-4A0A0A6YXF1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv3-4A0A0A6YXF1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv3-4A0A0A6YXF1 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.87■□□□□ 0.77
Ighv3-4A0A0A6YXF1 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.87■□□□□ 0.77
Ighv3-4A0A0A6YXF1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv3-4A0A0A6YXF1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv3-4A0A0A6YXF1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Ighv3-4A0A0A6YXF1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv3-4A0A0A6YXF1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv3-4A0A0A6YXF1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv3-4A0A0A6YXF1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ighv3-4A0A0A6YXF1 Mir3960-201ENSMUST00000198213 73 ntBASIC19.84■□□□□ 0.77
Ighv3-4A0A0A6YXF1 Gm16437-201ENSMUST00000025669 507 ntBASIC19.84■□□□□ 0.77
Ighv3-4A0A0A6YXF1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ighv3-4A0A0A6YXF1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.83■□□□□ 0.77
Ighv3-4A0A0A6YXF1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.81■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.81■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.8■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Gm12366-201ENSMUST00000121722 873 ntBASIC19.8■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.8■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.8■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Gm5786-201ENSMUST00000085368 882 ntBASIC19.8■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.79■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.79■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv3-4A0A0A6YXF1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.78■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Gm37136-201ENSMUST00000194368 194 ntBASIC19.77■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ighv3-4A0A0A6YXF1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.76■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Gm45364-201ENSMUST00000210883 159 ntBASIC19.76■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.75■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv3-4A0A0A6YXF1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.74■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv3-4A0A0A6YXF1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.72■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv3-4A0A0A6YXF1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.71■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv3-4A0A0A6YXF1 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.7■□□□□ 0.74
Ighv3-4A0A0A6YXF1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ighv3-4A0A0A6YXF1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ighv3-4A0A0A6YXF1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.67■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.67■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.66■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.66■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ighv3-4A0A0A6YXF1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.65■□□□□ 0.74
Ighv3-4A0A0A6YXF1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.65■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Gm7332-201ENSMUST00000118351 454 ntBASIC19.65■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ighv3-4A0A0A6YXF1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.65■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ighv3-4A0A0A6YXF1 Gm27502-201ENSMUST00000183495 199 ntBASIC19.64■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.63■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv3-4A0A0A6YXF1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ighv3-4A0A0A6YXF1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms