Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Gm8109-201ENSMUST00000194076 746 ntBASIC18.06■□□□□ 0.48
Trav16A0A075B653 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trav16A0A075B653 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav16A0A075B653 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav16A0A075B653 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav16A0A075B653 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav16A0A075B653 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav16A0A075B653 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav16A0A075B653 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav16A0A075B653 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav16A0A075B653 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav16A0A075B653 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trav16A0A075B653 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav16A0A075B653 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav16A0A075B653 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav16A0A075B653 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav16A0A075B653 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav16A0A075B653 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.03■□□□□ 0.48
Trav16A0A075B653 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav16A0A075B653 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav16A0A075B653 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav16A0A075B653 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav16A0A075B653 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav16A0A075B653 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav16A0A075B653 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav16A0A075B653 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.01■□□□□ 0.47
Trav16A0A075B653 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav16A0A075B653 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav16A0A075B653 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav16A0A075B653 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav16A0A075B653 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Trav16A0A075B653 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav16A0A075B653 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav16A0A075B653 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav16A0A075B653 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trav16A0A075B653 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Trav16A0A075B653 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav16A0A075B653 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav16A0A075B653 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trav16A0A075B653 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav16A0A075B653 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trav16A0A075B653 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav16A0A075B653 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.97■□□□□ 0.47
Trav16A0A075B653 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav16A0A075B653 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trav16A0A075B653 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav16A0A075B653 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav16A0A075B653 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav16A0A075B653 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav16A0A075B653 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav16A0A075B653 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.95■□□□□ 0.46
Trav16A0A075B653 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav16A0A075B653 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav16A0A075B653 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav16A0A075B653 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav16A0A075B653 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav16A0A075B653 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav16A0A075B653 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav16A0A075B653 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trav16A0A075B653 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav16A0A075B653 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav16A0A075B653 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav16A0A075B653 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.93■□□□□ 0.46
Trav16A0A075B653 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Trav16A0A075B653 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav16A0A075B653 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav16A0A075B653 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav16A0A075B653 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav16A0A075B653 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav16A0A075B653 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
Trav16A0A075B653 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav16A0A075B653 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav16A0A075B653 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Trav16A0A075B653 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav16A0A075B653 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trav16A0A075B653 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav16A0A075B653 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav16A0A075B653 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav16A0A075B653 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav16A0A075B653 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav16A0A075B653 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav16A0A075B653 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav16A0A075B653 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav16A0A075B653 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav16A0A075B653 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav16A0A075B653 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav16A0A075B653 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav16A0A075B653 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav16A0A075B653 Gm16148-201ENSMUST00000119653 893 ntBASIC17.88■□□□□ 0.45
Trav16A0A075B653 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav16A0A075B653 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav16A0A075B653 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav16A0A075B653 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav16A0A075B653 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav16A0A075B653 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav16A0A075B653 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav16A0A075B653 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav16A0A075B653 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav16A0A075B653 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav16A0A075B653 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 108.3 ms