Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19,49■□□□□ 0,71
Trav5-4A0A075B652 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19,49■□□□□ 0,71
Trav5-4A0A075B652 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19,48■□□□□ 0,71
Trav5-4A0A075B652 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19,48■□□□□ 0,71
Trav5-4A0A075B652 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19,48■□□□□ 0,71
Trav5-4A0A075B652 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19,48■□□□□ 0,71
Trav5-4A0A075B652 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19,48■□□□□ 0,71
Trav5-4A0A075B652 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19,47■□□□□ 0,71
Trav5-4A0A075B652 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19,47■□□□□ 0,71
Trav5-4A0A075B652 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19,47■□□□□ 0,71
Trav5-4A0A075B652 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19,47■□□□□ 0,71
Trav5-4A0A075B652 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19,46■□□□□ 0,71
Trav5-4A0A075B652 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19,46■□□□□ 0,71
Trav5-4A0A075B652 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19,46■□□□□ 0,71
Trav5-4A0A075B652 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19,46■□□□□ 0,71
Trav5-4A0A075B652 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19,46■□□□□ 0,71
Trav5-4A0A075B652 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19,46■□□□□ 0,71
Trav5-4A0A075B652 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19,46■□□□□ 0,71
Trav5-4A0A075B652 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19,44■□□□□ 0,7
Trav5-4A0A075B652 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19,44■□□□□ 0,7
Trav5-4A0A075B652 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19,43■□□□□ 0,7
Trav5-4A0A075B652 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19,43■□□□□ 0,7
Trav5-4A0A075B652 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19,43■□□□□ 0,7
Trav5-4A0A075B652 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19,43■□□□□ 0,7
Trav5-4A0A075B652 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19,43■□□□□ 0,7
Trav5-4A0A075B652 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19,42■□□□□ 0,7
Trav5-4A0A075B652 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19,42■□□□□ 0,7
Trav5-4A0A075B652 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19,42■□□□□ 0,7
Trav5-4A0A075B652 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19,42■□□□□ 0,7
Trav5-4A0A075B652 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19,41■□□□□ 0,7
Trav5-4A0A075B652 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19,41■□□□□ 0,7
Trav5-4A0A075B652 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19,41■□□□□ 0,7
Trav5-4A0A075B652 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19,41■□□□□ 0,7
Trav5-4A0A075B652 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19,41■□□□□ 0,7
Trav5-4A0A075B652 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19,4■□□□□ 0,7
Trav5-4A0A075B652 Gm30023-201ENSMUST00000197970 889 ntBASIC19,4■□□□□ 0,7
Trav5-4A0A075B652 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19,4■□□□□ 0,7
Trav5-4A0A075B652 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19,4■□□□□ 0,7
Trav5-4A0A075B652 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19,39■□□□□ 0,7
Trav5-4A0A075B652 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19,39■□□□□ 0,69
Trav5-4A0A075B652 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19,39■□□□□ 0,69
Trav5-4A0A075B652 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19,39■□□□□ 0,69
Trav5-4A0A075B652 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19,38■□□□□ 0,69
Trav5-4A0A075B652 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19,38■□□□□ 0,69
Trav5-4A0A075B652 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19,38■□□□□ 0,69
Trav5-4A0A075B652 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19,37■□□□□ 0,69
Trav5-4A0A075B652 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19,37■□□□□ 0,69
Trav5-4A0A075B652 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19,37■□□□□ 0,69
Trav5-4A0A075B652 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19,37■□□□□ 0,69
Trav5-4A0A075B652 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19,37■□□□□ 0,69
Trav5-4A0A075B652 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19,37■□□□□ 0,69
Trav5-4A0A075B652 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19,36■□□□□ 0,69
Trav5-4A0A075B652 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19,36■□□□□ 0,69
Trav5-4A0A075B652 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19,36■□□□□ 0,69
Trav5-4A0A075B652 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19,36■□□□□ 0,69
Trav5-4A0A075B652 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19,36■□□□□ 0,69
Trav5-4A0A075B652 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19,36■□□□□ 0,69
Trav5-4A0A075B652 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19,35■□□□□ 0,69
Trav5-4A0A075B652 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19,35■□□□□ 0,69
Trav5-4A0A075B652 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19,35■□□□□ 0,69
Trav5-4A0A075B652 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19,34■□□□□ 0,69
Trav5-4A0A075B652 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19,34■□□□□ 0,69
Trav5-4A0A075B652 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19,34■□□□□ 0,69
Trav5-4A0A075B652 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19,33■□□□□ 0,68
Trav5-4A0A075B652 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19,32■□□□□ 0,68
Trav5-4A0A075B652 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19,32■□□□□ 0,68
Trav5-4A0A075B652 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19,32■□□□□ 0,68
Trav5-4A0A075B652 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19,32■□□□□ 0,68
Trav5-4A0A075B652 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19,31■□□□□ 0,68
Trav5-4A0A075B652 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19,31■□□□□ 0,68
Trav5-4A0A075B652 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19,31■□□□□ 0,68
Trav5-4A0A075B652 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19,31■□□□□ 0,68
Trav5-4A0A075B652 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19,31■□□□□ 0,68
Trav5-4A0A075B652 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19,31■□□□□ 0,68
Trav5-4A0A075B652 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19,3■□□□□ 0,68
Trav5-4A0A075B652 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19,3■□□□□ 0,68
Trav5-4A0A075B652 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19,3■□□□□ 0,68
Trav5-4A0A075B652 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19,3■□□□□ 0,68
Trav5-4A0A075B652 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19,3■□□□□ 0,68
Trav5-4A0A075B652 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19,29■□□□□ 0,68
Trav5-4A0A075B652 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19,29■□□□□ 0,68
Trav5-4A0A075B652 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19,28■□□□□ 0,68
Trav5-4A0A075B652 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19,27■□□□□ 0,68
Trav5-4A0A075B652 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19,27■□□□□ 0,68
Trav5-4A0A075B652 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19,26■□□□□ 0,67
Trav5-4A0A075B652 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19,26■□□□□ 0,67
Trav5-4A0A075B652 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19,26■□□□□ 0,67
Trav5-4A0A075B652 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19,26■□□□□ 0,67
Trav5-4A0A075B652 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19,26■□□□□ 0,67
Trav5-4A0A075B652 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19,26■□□□□ 0,67
Trav5-4A0A075B652 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19,26■□□□□ 0,67
Trav5-4A0A075B652 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19,26■□□□□ 0,67
Trav5-4A0A075B652 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19,26■□□□□ 0,67
Trav5-4A0A075B652 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19,26■□□□□ 0,67
Trav5-4A0A075B652 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19,25■□□□□ 0,67
Trav5-4A0A075B652 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19,25■□□□□ 0,67
Trav5-4A0A075B652 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19,25■□□□□ 0,67
Trav5-4A0A075B652 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19,25■□□□□ 0,67
Trav5-4A0A075B652 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19,25■□□□□ 0,67
Trav5-4A0A075B652 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19,24■□□□□ 0,67
Retrieved 100 of 76,532 protein–RNA pairs in 13,4 ms